FFCP PHASE1:Hg19::chr5:61213127..61213133,-: Difference between revisions
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|id=chr5:61213127..61213133,-
|short_description=p@chr5:61213127..61213133,-
|description=CAGE_peak_at_chr5:61213127..61213133,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:61213127..61213133,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr5:61213127..61213133,- | |||
|id=chr5:61213127..61213133,- | |||
|ontology_enrichment_celltype=CL:0000244!2.58e-30!4;CL:0000731!2.58e-30!4;CL:0002368!3.59e-26!13;CL:0000066!3.21e-16!254;CL:1000507!1.53e-14!12;CL:1000494!1.53e-14!12;CL:0002159!1.17e-13!13;CL:1000497!1.35e-13!18;CL:0002518!1.35e-13!18;CL:0002202!6.22e-13!9;CL:0002632!6.22e-13!9;CL:0002076!4.18e-12!43;CL:1000449!7.20e-11!16;CL:0002621!1.34e-10!3;CL:0000239!1.55e-10!3;CL:1000615!1.55e-10!3;CL:0002306!1.55e-10!3;CL:0000068!2.06e-10!3;CL:0000069!2.06e-10!3;CL:0000307!2.06e-10!3;CL:0000377!2.06e-10!3;CL:0002166!3.16e-10!3;CL:0002681!6.72e-09!13;CL:0002584!6.72e-09!13;CL:0000362!8.34e-09!8;CL:0000223!1.90e-08!59;CL:0002327!2.56e-08!4;CL:0000312!9.70e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000244;4.01e-64;4!CL:0000731;4.01e-64;4!CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0000362;1.58e-13;9!CL:0002159;4.75e-09;14!CL:0002327;2.26e-08;4!CL:0000312;6.04e-07;5!CL:0000622;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.61e-64,4;CL:0000731,2.61e-64,4;CL:0000317,2.74e-15,2;CL:1000448,2.74e-15,2;CL:0002308,2.74e-15,2;CL:0002140,2.74e-15,2;CL:0000362,1.91e-13,9;CL:0002159,5.36e-09,14;CL:0002327,2.26e-08,4;CL:0000312,6.39e-07,5;CL:0000622,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.63e-24!5;UBERON:0005910!2.70e-20!6;UBERON:0006554!1.04e-14!44;UBERON:0009773!1.53e-14!12;UBERON:0001231!1.53e-14!12;UBERON:0004810!1.53e-14!12;UBERON:0001008!2.40e-14!45;UBERON:0004211!7.20e-11!16;UBERON:0001285!7.20e-11!16;UBERON:0007684!7.20e-11!16;UBERON:0003220!7.20e-11!16;UBERON:0004208!7.20e-11!16;UBERON:0001949!1.34e-10!3;UBERON:0006853!1.55e-10!3;UBERON:0007685!1.55e-10!3;UBERON:0004134!1.55e-10!3;UBERON:0006555!3.21e-10!17;UBERON:0005103!3.21e-10!17;UBERON:0000083!3.21e-10!17;UBERON:0009201!3.21e-10!17;UBERON:0004819!3.21e-10!17;UBERON:0006553!3.21e-10!17;UBERON:0003074!3.21e-10!17;UBERON:0003060!3.21e-10!17;UBERON:0000080!1.21e-09!18;UBERON:0002120!1.21e-09!18;UBERON:0004875!1.21e-09!18;UBERON:0005721!1.21e-09!18;UBERON:0005754!1.21e-09!18;UBERON:0007297!1.21e-09!18;UBERON:0002113!6.67e-09!27;UBERON:0003918!6.67e-09!27;UBERON:0005095!6.67e-09!27;UBERON:0007687!6.67e-09!27;UBERON:0001225!6.72e-09!13;UBERON:0008987!6.72e-09!13;UBERON:0004876!1.17e-08!20;UBERON:0007196!2.30e-08!14;UBERON:0001558!2.30e-08!14;UBERON:0001911!2.56e-08!4;UBERON:0005333!2.56e-08!4;UBERON:0008425!2.56e-08!4;UBERON:0005311!2.56e-08!4;UBERON:0003887!3.09e-08!21;UBERON:0001708!6.95e-08!4;UBERON:0001704!6.95e-08!4;UBERON:0000489!1.97e-07!32;UBERON:0001851!2.98e-07!16;UBERON:0000353!7.85e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.63e-51;5!UBERON:0005910;4.21e-43;6!UBERON:0000486;5.10e-22;12!UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0006554;2.92e-09;30!UBERON:0001008;2.92e-09;30!UBERON:0001003;1.65e-08;15!UBERON:0007376;1.65e-08;15!UBERON:0001911;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.15e-51,5;UBERON:0005910,3.16e-43,6;UBERON:0002419,2.74e-15,2;UBERON:0007771,2.74e-15,2;UBERON:0003297,2.74e-15,2;UBERON:0001821,2.74e-15,2;UBERON:0003487,2.74e-15,2;UBERON:0001820,2.74e-15,2;UBERON:0005089,2.74e-15,2;UBERON:0005088,2.74e-15,2;UBERON:0001003,1.85e-08,15;UBERON:0007376,1.85e-08,15;UBERON:0007383,1.85e-08,15;UBERON:0001911,2.26e-08,4;UBERON:0005333,2.26e-08,4;UBERON:0008425,2.26e-08,4;UBERON:0005311,2.26e-08,4 | |||
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|short_description=p@chr5:61213127..61213133,- | |||
}} | }} |
Latest revision as of 15:38, 30 July 2015
Short description: | p@chr5:61213127..61213133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:61213127..61213133, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.61e-64 | 4 |
urothelial cell | 2.61e-64 | 4 |
sebum secreting cell | 2.74e-15 | 2 |
epithelial cell of sweat gland | 2.74e-15 | 2 |
epithelial cell of skin gland | 2.74e-15 | 2 |
acinar cell of sebaceous gland | 2.74e-15 | 2 |
epidermal cell | 1.91e-13 | 9 |
general ecto-epithelial cell | 5.36e-09 | 14 |
mammary gland epithelial cell | 2.26e-08 | 4 |
keratinocyte | 6.39e-07 | 5 |
acinar cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.15e-51 | 5 |
transitional epithelium | 3.16e-43 | 6 |
skin gland | 2.74e-15 | 2 |
epidermis gland | 2.74e-15 | 2 |
gland of integumental system | 2.74e-15 | 2 |
sebaceous gland | 2.74e-15 | 2 |
skin sebaceous gland | 2.74e-15 | 2 |
sweat gland | 2.74e-15 | 2 |
sweat gland placode | 2.74e-15 | 2 |
sebaceous gland placode | 2.74e-15 | 2 |
skin epidermis | 1.85e-08 | 15 |
outer epithelium | 1.85e-08 | 15 |
enveloping layer of ectoderm | 1.85e-08 | 15 |
mammary gland | 2.26e-08 | 4 |
mammary bud | 2.26e-08 | 4 |
mammary ridge | 2.26e-08 | 4 |
mammary placode | 2.26e-08 | 4 |