FFCP PHASE1:Hg19::chr5:83680379..83680402,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000515688_5end | |association_with_transcript=5bp_to_ENST00000515688_5end | ||
|cluster_id=chr5:83680379..83680402,+ | |||
|description=CAGE_peak_1_at_ENST00000515688_5end | |description=CAGE_peak_1_at_ENST00000515688_5end | ||
|id=chr5:83680379..83680402,+ | |id=chr5:83680379..83680402,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.28e-17!180;CL:0000359!2.46e-10!32;CL:0002319!3.30e-07!25;CL:0000393!4.85e-07!60;CL:0000211!4.85e-07!60;CL:0000192!5.96e-07!42;CL:0000514!5.96e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.28e-17!180;CL:0000359!2.46e-10!32;CL:0002319!3.30e-07!25;CL:0000393!4.85e-07!60;CL:0000211!4.85e-07!60;CL:0000192!5.96e-07!42;CL:0000514!5.96e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.10e-14;5!CL:0002603;5.23e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.14e-14,5;CL:0002603,7.80e-08,3;CL:0000133,3.55e-07,59;CL:0000221,5.48e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.31e-07!286;UBERON:0002049!4.06e-07!79;UBERON:0007798!4.06e-07!79;UBERON:0000475!5.92e-07!365;UBERON:0001637!7.15e-07!42;UBERON:0003509!7.15e-07!42;UBERON:0004572!7.15e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,1.26858963686374,3.00219895059391,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,1.65698687863958,0.672325146451775,0,1.46062018077475,2.43966399395253,1.10808952269109,2.44800829493104,1.25381888591235,0,0.273748850145768,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0.50133791063589,1.44846518960824,0.795285947051099,2.91980922181582,0.756278537312543,0.886917589850256,1.75669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0.25326102332916,1.19168262731897,1.72101972449288,0.354668382198357,1.12135520028461,6.4049397437823,1.2333377420858,0.311211035399766,0.538842688278752,0,0.756787138224657,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,1.18800285728205,1.23633464639278,0,0,0,0.125118519871964,0,0.438977620880838,0,2.10333282469236,0.113432183160021,0.89694817844431,0.640672166455702,0,0.300091096084402,0.515262646192195,0.772921620136887,0.37223371266318,0.168776332241266,0.194874010322397,1.00973509697646,0.368199594569197,0.161646056818812,0.355009592516614,0.705264687593482,0.169560592310488,0.193260853163297,0.272746120590835,0,5.73276418809098,4.90360142789496,6.15827897208447,4.14644220061482,5.80337957013945,6.20461510428911,0,0.643240938192885,0,2.3218396401599,1.44375896333917,0.709840800239063,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0.34779121492523,2.81780866165972,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.517086863031111,0,0,0.797814349754612,0,0.257207374262142,0,0,1.00084595560703,0,0.823240336780769,0.325736184293735,1.42156779497018,0,0.301439377059586,0,0.499864955910285,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,0,0.542530047399471,2.07970861530807,2.67643483195743,2.52323864054295,0,0.601892199455438,2.27407504055985,0,0.664225598535437,1.65932251687533,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.256278298511402,0,0.965123526861645,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.633309773357254,0,0.170093705276516,0,0,0,2.00675909541941,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0.929691098594572,0.94443704049192,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.9266210955196,0.429374660225974,0,2.53103539774981,1.14378116354295,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0,0.606547444719948,1.58510321173008,0,0,1.21856744815642,0,0,0,2.26016233240486,0,0.66343897524122,1.31535265576129,0,0,2.23201414658974,0.30982349809975,0.281695602532241,0.286822704408103,0.589494246078727,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,1.19548792950642,0.552567831062295,0,4.09074730008619,26.3401483686689,0.622079175323615,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.556608588971108,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0.123563938946503,0,0.269604531922708,0,0.702793337176017,0,1.17398771359254,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.698906672968121,2.92376255201748,0,0,0,0,0,0,0.137041924646751,0,0.189932387867636,0.586654148204409,0.240476460754601,1.06726497369676,1.19885765749278,0,0,0,0.288109595976299,0.248505071130865,0,0.543616824294456,0.313808538937,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0.859530882839914,0.262887354279314,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0,1.08089965062721,0,0,0,0,0.196854963029498,0,0,0,4.66184130548556,11.2782338009732,10.8014487887588,0,0,0.182248669974074,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,1.19730191562487,0,0.681552087141687,0,0,0,0.387848869084652,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0.310482014706917,0,1.37478448758317,0,0,0,0.936669811613763,0,0.149254802886874,0,0.554805861502613,0.189403005275089,1.25783950876288,0,0.228840068396924,0.151230923763239,0.15543720058278,0.295710299979268,0,1.34940933649081,0.155262956876259,0.414706207840855,0.797525143673985,1.5652351854352,0,0.761610424337591,0,0.363697318405119,0.214821114084977,0,1.19428766609585,0.800055529326307,0.343395705182793,0,2.52369796457302,0.57785949122191,1.71553273099941,0.521988583930423,1.58694147858591,0.694567422971502,0,0.179088841081487,0,0.877136198314828,0.353378291891762,0,0,0,0.345430341731199,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0.368211900503681,0,0,0,0,0.314531883711793,0,0,0.425149840203366,0.123935764259002,0,2.22603045457393,0,0,0,0.918736432059601,0.385375350578757,2.8339315265117,0.159633859057151,0,0,0.414943514785307,0.161475645631851,0,0.196295437002051,0,0.366857197043358,0.346576998451015,1.1441462864015,0,0.397832444232549,0.0752103283492573,0.40341013740704,0,0,2.12903492763126,0,0.270150338473579,0,0,0.253663240775627,0,0,0,0.175871244359621,0.894336993477167,0,0,0,0,0.177404740325278,0.115233987555779,0.514464028312255,0.0679697329768317,0.263091094251396,1.06374456795571,0.222462803784138,0.156986185701028,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,1.35941691750254,0,0,0,0.357107877211315,0,0,0.730336388246517,0,0.143339583151451,0,0.203974470572744,0.436350690340377,0,0,1.38652688589425,0,0,0.546327859818478,0,3.67159787071134,1.60330443159336,4.68663987627709,0,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0,1.00918676322552,0,0,0.217716747896961,0,0,0.430333232356058,0,0.488419611665847,0,0,0.359300808426348,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0.214100523890983,1.26858963686374,3.00219895059391,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,1.65698687863958,0.672325146451775,0,1.46062018077475,2.43966399395253,1.10808952269109,2.44800829493104,1.25381888591235,0,0.273748850145768,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0.50133791063589,1.44846518960824,0.795285947051099,2.91980922181582,0.756278537312543,0.886917589850256,1.75669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0.25326102332916,1.19168262731897,1.72101972449288,0.354668382198357,1.12135520028461,6.4049397437823,1.2333377420858,0.311211035399766,0.538842688278752,0,0.756787138224657,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,1.18800285728205,1.23633464639278,0,0,0,0.125118519871964,0,0.438977620880838,0,2.10333282469236,0.113432183160021,0.89694817844431,0.640672166455702,0,0.300091096084402,0.515262646192195,0.772921620136887,0.37223371266318,0.168776332241266,0.194874010322397,1.00973509697646,0.368199594569197,0.161646056818812,0.355009592516614,0.705264687593482,0.169560592310488,0.193260853163297,0.272746120590835,0,5.73276418809098,4.90360142789496,6.15827897208447,4.14644220061482,5.80337957013945,6.20461510428911,0,0.643240938192885,0,2.3218396401599,1.44375896333917,0.709840800239063,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0.34779121492523,2.81780866165972,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.517086863031111,0,0,0.797814349754612,0,0.257207374262142,0,0,1.00084595560703,0,0.823240336780769,0.325736184293735,1.42156779497018,0,0.301439377059586,0,0.499864955910285,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,0,0.542530047399471,2.07970861530807,2.67643483195743,2.52323864054295,0,0.601892199455438,2.27407504055985,0,0.664225598535437,1.65932251687533,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.256278298511402,0,0.965123526861645,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.633309773357254,0,0.170093705276516,0,0,0,2.00675909541941,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0.929691098594572,0.94443704049192,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.9266210955196,0.429374660225974,0,2.53103539774981,1.14378116354295,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0,0.606547444719948,1.58510321173008,0,0,1.21856744815642,0,0,0,2.26016233240486,0,0.66343897524122,1.31535265576129,0,0,2.23201414658974,0.30982349809975,0.281695602532241,0.286822704408103,0.589494246078727,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,1.19548792950642,0.552567831062295,0,4.09074730008619,26.3401483686689,0.622079175323615,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.556608588971108,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,1.59518878185802,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0.123563938946503,0,0.269604531922708,0,0.702793337176017,0,1.17398771359254,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.698906672968121,2.92376255201748,0,0,0,0,0,0,0.137041924646751,0,0.189932387867636,0.586654148204409,0.240476460754601,1.06726497369676,1.19885765749278,0,0,0,0.288109595976299,0.248505071130865,0,0.543616824294456,0.313808538937,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0.859530882839914,0.262887354279314,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0,1.08089965062721,0,0,0,0,0.196854963029498,0,0,0,4.66184130548556,11.2782338009732,10.8014487887588,0,0,0.182248669974074,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,1.19730191562487,0,0.681552087141687,0,0,0,0.387848869084652,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0.310482014706917,0,1.37478448758317,0,0,0,0.936669811613763,0,0.149254802886874,0,0.554805861502613,0.189403005275089,1.25783950876288,0,0.228840068396924,0.151230923763239,0.15543720058278,0.295710299979268,0,1.34940933649081,0.155262956876259,0.414706207840855,0.797525143673985,1.5652351854352,0,0.761610424337591,0,0.363697318405119,0.214821114084977,0,1.19428766609585,0.800055529326307,0.343395705182793,0,2.52369796457302,0.57785949122191,1.71553273099941,0.521988583930423,1.58694147858591,0.694567422971502,0,0.179088841081487,0,0.877136198314828,0.353378291891762,0,0,0,0.345430341731199,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0.368211900503681,0,0,0,0,0.314531883711793,0,0,0.425149840203366,0.123935764259002,0,2.22603045457393,0,0,0,0.918736432059601,0.385375350578757,2.8339315265117,0.159633859057151,0,0,0.414943514785307,0.161475645631851,0,0.196295437002051,0,0.366857197043358,0.346576998451015,1.1441462864015,0,0.397832444232549,0.0752103283492573,0.40341013740704,0,0,2.12903492763126,0,0.270150338473579,0,0,0.253663240775627,0,0,0,0.175871244359621,0.894336993477167,0,0,0,0,0.177404740325278,0.115233987555779,0.514464028312255,0.0679697329768317,0.263091094251396,1.06374456795571,0.222462803784138,0.156986185701028,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,1.35941691750254,0,0,0,0.357107877211315,0,0,0.730336388246517,0,0.143339583151451,0,0.203974470572744,0.436350690340377,0,0,1.38652688589425,0,0,0.546327859818478,0,3.67159787071134,1.60330443159336,4.68663987627709,0,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0,1.00918676322552,0,0,0.217716747896961,0,0,0.430333232356058,0,0.488419611665847,0,0,0.359300808426348,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p1@ENST00000515688 | |short_description=p1@ENST00000515688 | ||
}} | }} |
Latest revision as of 16:58, 30 July 2015
Short description: | p1@ENST00000515688 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000515688_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000515688_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.14e-14 | 5 |
astrocyte of the cerebellum | 7.80e-08 | 3 |
neurectodermal cell | 3.55e-07 | 59 |
ectodermal cell | 5.48e-07 | 72 |