FFCP PHASE1:Hg19::chr6:107150751..107150783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:107150751..107150783,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr6:107150751..107150783,+ | |||
|id=chr6:107150751..107150783,+ | |||
|ontology_enrichment_celltype=CL:0000236!6.17e-19!14;CL:0000945!1.25e-15!24;CL:0000826!1.25e-15!24;CL:0000181!3.05e-13!12;CL:0000417!3.05e-13!12;CL:0000668!3.05e-13!12;CL:0000414!3.05e-13!12;CL:0000412!3.05e-13!12;CL:0000182!3.05e-13!12;CL:0000817!2.61e-11!3;CL:0000542!2.57e-08!53;CL:0000051!2.57e-08!53;CL:0000785!6.77e-08!2;CL:0000955!6.77e-08!2;CL:0000818!6.77e-08!2;CL:0000954!6.77e-08!2;CL:0000816!6.77e-08!2;CL:0000838!3.94e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.49e-13;13!CL:0000785;5.62e-12;1!CL:0000819;5.62e-12;1!CL:0000817;6.97e-12;1!CL:0000945;8.00e-11;24!CL:0000182;1.42e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,4.28e-15,3;CL:0000236,3.40e-12,14;CL:0000819,5.62e-12,1;CL:0000945,7.51e-11,24;CL:0000826,7.51e-11,24;CL:0000182,1.30e-08,12;CL:0000542,9.85e-07,53;CL:0000051,9.85e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.25e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.62e-12;1!DOID:8675;5.62e-12;1!DOID:12603;6.97e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.62e-12,1;DOID:8675,5.62e-12,1;DOID:12603,6.97e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!3.57e-11!26;UBERON:0009854!9.62e-11!23;UBERON:0002107!1.59e-10!19;UBERON:0006925!1.59e-10!19;UBERON:0008836!1.59e-10!19;UBERON:0009497!1.25e-09!25;UBERON:0000015!1.25e-09!25;UBERON:0002423!1.25e-09!25;UBERON:0006235!1.25e-09!25;UBERON:0004161!1.25e-09!25;UBERON:0009856!2.63e-09!26;UBERON:0008835!6.69e-09!22;UBERON:0003894!6.69e-09!22;UBERON:0003127!4.79e-08!2;UBERON:0001041!6.26e-08!98;UBERON:0005177!8.53e-08!107;UBERON:0007499!1.14e-07!25;UBERON:0000466!1.47e-07!126;UBERON:0000341!1.59e-07!2;UBERON:0005172!1.82e-07!55;UBERON:0005173!1.82e-07!55;UBERON:0009569!3.93e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.25e-11;1!UBERON:0001153;1.25e-11;1!UBERON:0009854;1.25e-11;1!UBERON:0002107;2.93e-09;19!UBERON:0006925;2.93e-09;19!UBERON:0002423;4.50e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.63e-11,1;UBERON:0001153,1.63e-11,1;UBERON:0001045,1.63e-11,1;UBERON:0009854,1.76e-11,23;UBERON:0009856,3.83e-10,26;UBERON:0002107,2.72e-09,19;UBERON:0006925,2.72e-09,19;UBERON:0008836,2.72e-09,19;UBERON:0008835,4.79e-08,22;UBERON:0003894,4.79e-08,22;UBERON:0007499,4.26e-07,25;UBERON:0009497,4.26e-07,25;UBERON:0000015,4.26e-07,25;UBERON:0002423,4.26e-07,25;UBERON:0006235,4.26e-07,25;UBERON:0004161,4.26e-07,25 | |||
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| ||
|short_description=p@chr6:107150751..107150783,+ | |||
}} | }} |
Latest revision as of 17:59, 30 July 2015
Short description: | p@chr6:107150751..107150783, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:107150751..107150783, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 4.28e-15 | 3 |
B cell | 3.40e-12 | 14 |
B-1 B cell | 5.62e-12 | 1 |
lymphocyte of B lineage | 7.51e-11 | 24 |
pro-B cell | 7.51e-11 | 24 |
hepatocyte | 1.30e-08 | 12 |
lymphocyte | 9.85e-07 | 53 |
common lymphoid progenitor | 9.85e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.63e-11 | 1 |
caecum | 1.63e-11 | 1 |
midgut | 1.63e-11 | 1 |
digestive tract diverticulum | 1.76e-11 | 23 |
sac | 3.83e-10 | 26 |
liver | 2.72e-09 | 19 |
digestive gland | 2.72e-09 | 19 |
liver bud | 2.72e-09 | 19 |
hepatic diverticulum | 4.79e-08 | 22 |
liver primordium | 4.79e-08 | 22 |
epithelial sac | 4.26e-07 | 25 |
epithelium of foregut-midgut junction | 4.26e-07 | 25 |
anatomical boundary | 4.26e-07 | 25 |
hepatobiliary system | 4.26e-07 | 25 |
foregut-midgut junction | 4.26e-07 | 25 |
septum transversum | 4.26e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.62e-12 | 1 |
lymphosarcoma | 5.62e-12 | 1 |
acute leukemia | 6.97e-12 | 1 |