FFCP PHASE1:Hg19::chr6:111839306..111839347,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:111839306..111839347,- | |||
|coexpression_cluster_id=C233 | |coexpression_cluster_id=C233 | ||
|description=CAGE_peak_at_chr6:111839306..111839347,- | |description=CAGE_peak_at_chr6:111839306..111839347,- | ||
|id=chr6:111839306..111839347,- | |id=chr6:111839306..111839347,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;5.96e-34;3!DOID:3908;5.15e-21;5!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,5.96e-34,3;DOID:3908,5.15e-21,5;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.96e-21!57;UBERON:0005068!2.96e-21!57;UBERON:0006241!2.96e-21!57;UBERON:0007135!2.96e-21!57;UBERON:0007023!3.59e-19!115;UBERON:0002616!6.19e-18!59;UBERON:0001017!6.07e-17!82;UBERON:0002791!8.59e-17!33;UBERON:0000955!1.78e-16!69;UBERON:0006238!1.78e-16!69;UBERON:0002020!2.60e-16!34;UBERON:0003528!2.60e-16!34;UBERON:0001893!3.05e-16!34;UBERON:0005743!5.78e-16!86;UBERON:0002346!2.33e-15!90;UBERON:0003075!1.62e-14!86;UBERON:0007284!1.62e-14!86;UBERON:0000073!4.63e-14!94;UBERON:0001016!4.63e-14!94;UBERON:0002298!5.65e-14!8;UBERON:0002780!4.01e-13!41;UBERON:0001890!4.01e-13!41;UBERON:0006240!4.01e-13!41;UBERON:0003080!9.24e-13!42;UBERON:0001869!5.99e-12!32;UBERON:0002619!1.34e-11!22;UBERON:0003076!1.81e-10!15;UBERON:0003057!1.81e-10!15;UBERON:0000956!4.09e-10!25;UBERON:0000203!4.09e-10!25;UBERON:0001950!8.38e-10!20;UBERON:0004733!3.00e-09!12;UBERON:0002028!3.00e-09!12;UBERON:0007277!3.00e-09!12;UBERON:0000349!5.09e-09!5;UBERON:0002021!1.06e-08!5;UBERON:0004732!1.62e-08!13;UBERON:0002420!1.85e-08!9;UBERON:0007245!1.85e-08!9;UBERON:0010009!1.85e-08!9;UBERON:0010011!1.85e-08!9;UBERON:0000454!1.85e-08!9;UBERON:0002308!3.14e-08!9;UBERON:0000125!3.14e-08!9;UBERON:0003056!4.07e-08!61;UBERON:0000033!1.17e-07!123;UBERON:0000924!1.81e-07!173;UBERON:0006601!1.81e-07!173;UBERON:0006331!3.77e-07!3;UBERON:0000153!3.89e-07!129;UBERON:0007811!3.89e-07!129;UBERON:0000988!4.97e-07!3;UBERON:0004121!6.93e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!2.96e-21!57;UBERON:0005068!2.96e-21!57;UBERON:0006241!2.96e-21!57;UBERON:0007135!2.96e-21!57;UBERON:0007023!3.59e-19!115;UBERON:0002616!6.19e-18!59;UBERON:0001017!6.07e-17!82;UBERON:0002791!8.59e-17!33;UBERON:0000955!1.78e-16!69;UBERON:0006238!1.78e-16!69;UBERON:0002020!2.60e-16!34;UBERON:0003528!2.60e-16!34;UBERON:0001893!3.05e-16!34;UBERON:0005743!5.78e-16!86;UBERON:0002346!2.33e-15!90;UBERON:0003075!1.62e-14!86;UBERON:0007284!1.62e-14!86;UBERON:0000073!4.63e-14!94;UBERON:0001016!4.63e-14!94;UBERON:0002298!5.65e-14!8;UBERON:0002780!4.01e-13!41;UBERON:0001890!4.01e-13!41;UBERON:0006240!4.01e-13!41;UBERON:0003080!9.24e-13!42;UBERON:0001869!5.99e-12!32;UBERON:0002619!1.34e-11!22;UBERON:0003076!1.81e-10!15;UBERON:0003057!1.81e-10!15;UBERON:0000956!4.09e-10!25;UBERON:0000203!4.09e-10!25;UBERON:0001950!8.38e-10!20;UBERON:0004733!3.00e-09!12;UBERON:0002028!3.00e-09!12;UBERON:0007277!3.00e-09!12;UBERON:0000349!5.09e-09!5;UBERON:0002021!1.06e-08!5;UBERON:0004732!1.62e-08!13;UBERON:0002420!1.85e-08!9;UBERON:0007245!1.85e-08!9;UBERON:0010009!1.85e-08!9;UBERON:0010011!1.85e-08!9;UBERON:0000454!1.85e-08!9;UBERON:0002308!3.14e-08!9;UBERON:0000125!3.14e-08!9;UBERON:0003056!4.07e-08!61;UBERON:0000033!1.17e-07!123;UBERON:0000924!1.81e-07!173;UBERON:0006601!1.81e-07!173;UBERON:0006331!3.77e-07!3;UBERON:0000153!3.89e-07!129;UBERON:0007811!3.89e-07!129;UBERON:0000988!4.97e-07!3;UBERON:0004121!6.93e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;9.37e-99;1!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,9.37e-99,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0.441280633457501,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0,0,0,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76741632313179,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0.441280633457501,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0,0,0,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76741632313179,0,0,0,0 | ||
|short_description=p@chr6:111839306..111839347,- | |short_description=p@chr6:111839306..111839347,- | ||
}} | }} |
Latest revision as of 18:20, 30 July 2015
Short description: | p@chr6:111839306..111839347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:111839306..111839347, - |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 9.37e-99 | 1 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.96e-34 | 3 |
non-small cell lung carcinoma | 5.15e-21 | 5 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |