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FFCP PHASE1:Hg19::chr6:132455340..132455352,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-198bp_to_ENST00000443303_5end
|association_with_transcript=-198bp_to_ENST00000443303_5end
|cluster_id=chr6:132455340..132455352,+
|coexpression_cluster_id=C4560
|description=CAGE_peak_3_at_ENST00000443303_5end
|description=CAGE_peak_3_at_ENST00000443303_5end
|id=chr6:132455340..132455352,+
|id=chr6:132455340..132455352,+
|ontology_enrichment_celltype=CL:0002139!9.98e-54!24;CL:0000115!2.33e-41!35;CL:0000071!1.94e-39!18;CL:0002546!1.94e-39!18;CL:0002078!2.59e-31!44;CL:1000413!6.81e-24!9;CL:0000213!1.90e-22!57;CL:0000215!1.90e-22!57;CL:0002544!1.96e-16!6;CL:0002543!8.86e-16!6;CL:0005020!9.80e-16!6;CL:0002138!9.80e-16!6;CL:0005022!9.80e-16!6;CL:0000236!2.04e-13!14;CL:0000222!9.86e-10!119;CL:0002618!9.44e-09!3;CL:0000076!4.22e-08!62;CL:0000945!4.79e-07!24;CL:0000826!4.79e-07!24;CL:0002545!8.55e-07!2
|ontology_enrichment_celltype=CL:0002139!9.98e-54!24;CL:0000115!2.33e-41!35;CL:0000071!1.94e-39!18;CL:0002546!1.94e-39!18;CL:0002078!2.59e-31!44;CL:1000413!6.81e-24!9;CL:0000213!1.90e-22!57;CL:0000215!1.90e-22!57;CL:0002544!1.96e-16!6;CL:0002543!8.86e-16!6;CL:0005020!9.80e-16!6;CL:0002138!9.80e-16!6;CL:0005022!9.80e-16!6;CL:0000236!2.04e-13!14;CL:0000222!9.86e-10!119;CL:0002618!9.44e-09!3;CL:0000076!4.22e-08!62;CL:0000945!4.79e-07!24;CL:0000826!4.79e-07!24;CL:0002545!8.55e-07!2
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-85;24!CL:0000115;1.26e-59;36!CL:0000071;9.02e-57;18!CL:1000413;2.37e-48;9!CL:0002078;2.21e-34;45!CL:0002544;1.22e-32;6!CL:0002138;5.04e-31;6!CL:0000213;3.29e-24;58!CL:0000215;3.29e-24;58!CL:0002543;1.68e-22;6!CL:0000236;1.07e-18;13!CL:0002618;8.47e-17;3!CL:0002545;1.63e-12;2!CL:0000076;6.39e-10;63!CL:0000945;9.90e-10;24!CL:0000222;4.99e-07;1
|ontology_enrichment_celltype_v019_2=CL:0002139,9.34e-86,24;CL:0000115,1.47e-67,36;CL:0000071,1.14e-56,18;CL:0002546,1.14e-56,18;CL:0002078,4.49e-53,45;CL:1000413,2.08e-48,9;CL:0000213,4.41e-40,58;CL:0000215,4.41e-40,58;CL:0002544,1.07e-32,6;CL:0005020,3.14e-31,6;CL:0002138,3.14e-31,6;CL:0005022,3.14e-31,6;CL:0002543,2.41e-22,6;CL:0000222,1.59e-18,121;CL:0000236,2.15e-17,14;CL:0002618,1.37e-16,3;CL:0000076,4.99e-14,63;CL:0002545,1.64e-12,2;CL:0000945,8.78e-10,24;CL:0000826,8.78e-10,24;CL:0002321,4.00e-07,250;CL:0000066,4.42e-07,253
|ontology_enrichment_development_v019=CL:0002546;9.02e-57;18!CL:0005022;5.04e-31;6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:2513;4.33e-07;1
|ontology_enrichment_disease_v019_2=DOID:2513,4.33e-07,1
|ontology_enrichment_uberon=UBERON:0001986!1.94e-39!18;UBERON:0004638!1.94e-39!18;UBERON:0004852!1.94e-39!18;UBERON:0000487!2.45e-31!22;UBERON:0006914!5.71e-27!25;UBERON:0000055!1.78e-25!69;UBERON:0003915!6.81e-24!9;UBERON:0004700!6.81e-24!9;UBERON:0001917!6.81e-24!9;UBERON:0002049!3.82e-21!79;UBERON:0007798!3.82e-21!79;UBERON:0001981!4.27e-18!60;UBERON:0007500!4.27e-18!60;UBERON:0004537!4.27e-18!60;UBERON:0006965!4.27e-18!60;UBERON:0004535!2.07e-17!110;UBERON:0001009!1.06e-16!113;UBERON:0004872!2.68e-13!84;UBERON:0002465!7.98e-12!10;UBERON:0001473!1.40e-11!8;UBERON:0004536!1.40e-11!8;UBERON:0006558!1.40e-11!8;UBERON:0003914!5.02e-11!118;UBERON:0001638!3.18e-10!9;UBERON:0003920!3.18e-10!9;UBERON:0004582!3.18e-10!9;UBERON:0001637!4.23e-10!42;UBERON:0003509!4.23e-10!42;UBERON:0004572!4.23e-10!42;UBERON:0000947!2.24e-08!21;UBERON:0010191!2.24e-08!21;UBERON:0005800!8.55e-07!2;UBERON:0001515!8.55e-07!2
|ontology_enrichment_uberon_v019=UBERON:0004638;9.02e-57;18!UBERON:0001986;9.02e-57;18!UBERON:0004852;9.02e-57;18!UBERON:0003915;2.37e-48;9!UBERON:0004700;2.37e-48;9!UBERON:0001917;2.37e-48;9!UBERON:0000487;6.70e-46;22!UBERON:0006914;4.99e-40;25!UBERON:0000490;6.14e-27;33!UBERON:0001473;3.76e-23;8!UBERON:0004536;3.76e-23;8!UBERON:0006558;3.76e-23;8!UBERON:0002465;2.02e-18;10!UBERON:0000055;7.17e-17;65!UBERON:0001638;6.19e-15;9!UBERON:0003920;6.19e-15;9!UBERON:0004582;6.19e-15;9!UBERON:0005800;1.63e-12;2!UBERON:0001515;1.63e-12;2!UBERON:0002049;7.13e-12;75!UBERON:0007798;7.13e-12;75!UBERON:0002066;2.79e-10;5!UBERON:0007500;3.93e-10;56!UBERON:0001981;3.93e-10;56!UBERON:0004537;3.93e-10;56!UBERON:0001637;5.04e-09;42!UBERON:0003509;5.04e-09;42!UBERON:0004572;5.04e-09;42!UBERON:0000947;6.60e-09;21!UBERON:0010191;6.60e-09;21!UBERON:0003914;2.43e-08;74
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.14e-56,18;UBERON:0001986,1.14e-56,18;UBERON:0004852,1.14e-56,18;UBERON:0003915,2.08e-48,9;UBERON:0004700,2.08e-48,9;UBERON:0001917,2.08e-48,9;UBERON:0000487,8.12e-46,22;UBERON:0006914,5.90e-40,25;UBERON:0000055,2.28e-27,68;UBERON:0001473,2.64e-23,8;UBERON:0004536,2.64e-23,8;UBERON:0006558,2.64e-23,8;UBERON:0002049,2.78e-23,78;UBERON:0007798,2.78e-23,78;UBERON:0002465,1.53e-18,10;UBERON:0004535,2.16e-15,109;UBERON:0007500,3.50e-15,59;UBERON:0001981,3.50e-15,59;UBERON:0004537,3.50e-15,59;UBERON:0006965,3.50e-15,59;UBERON:0001009,7.33e-15,112;UBERON:0001638,7.82e-15,9;UBERON:0003920,7.82e-15,9;UBERON:0004582,7.82e-15,9;UBERON:0005800,1.64e-12,2;UBERON:0001515,1.64e-12,2;UBERON:0002066,3.71e-10,5;UBERON:0004872,6.15e-10,83;UBERON:0001637,3.85e-09,42;UBERON:0003509,3.85e-09,42;UBERON:0004572,3.85e-09,42;UBERON:0000947,6.37e-09,21;UBERON:0010191,6.37e-09,21;UBERON:0003914,2.13e-08,117
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|short_description=p3@ENST00000443303
|short_description=p3@ENST00000443303
}}
}}

Latest revision as of 19:30, 30 July 2015

Short description:p3@ENST00000443303
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_ENST00000443303_5end
Coexpression cluster:C4560_Endothelial_CD19_Lymphatic_CD34_Renal_Fibroblast_basal
Association with transcript: -198bp_to_ENST00000443303_5end
EntrezGene:NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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