FFCP PHASE1:Hg19::chr6:20988192..20988195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:20988192..20988195,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr6:20988192..20988195,+ | |description=CAGE_peak_at_chr6:20988192..20988195,+ | ||
|id=chr6:20988192..20988195,+ | |id=chr6:20988192..20988195,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1001319;1.53e-16;1!CL:1000600;1.53e-16;1!CL:0000047;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.63e-16,1;CL:1000600,2.63e-16,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:162!2.15e-07!235;DOID:14566!7.53e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.53e-16;1!UBERON:0000989;1.53e-16;1!UBERON:0004645;1.53e-16;1!UBERON:0002171;1.53e-16;1!UBERON:0008811;1.53e-16;1!UBERON:0006518;1.53e-16;1!UBERON:0008949;1.53e-16;1!UBERON:0000101;1.53e-16;1!UBERON:0001256;1.53e-16;1!UBERON:0002167;1.53e-16;1!UBERON:0001259;1.53e-16;1!UBERON:0001255;6.17e-09;2!UBERON:0001556;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,7.57e-17,1;UBERON:0008811,7.57e-17,1;UBERON:0006258,7.57e-17,1;UBERON:0005876,7.57e-17,1;UBERON:0004874,7.57e-17,1;UBERON:0007029,1.04e-16,1;UBERON:0002171,1.65e-16,1;UBERON:0006518,1.65e-16,1;UBERON:0008949,1.65e-16,1;UBERON:0000101,1.65e-16,1;UBERON:0002167,1.65e-16,1;UBERON:0004645,2.63e-16,1;UBERON:0001256,2.63e-16,1;UBERON:0001259,2.63e-16,1;UBERON:0001255,8.09e-09,2;UBERON:0001556,8.09e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0.25618263945135,0,0.657751618414705,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0.435050081742686,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,10.1340195901437,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0,0,0,2.06846023944879,0.291604613383254,0.347249989866585,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0.498635045700469,0,0,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0.426905989478705,0,0.144090417154106,0.114536596165916,1.02956998717179,0.288109595976299,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0.314408610199332,1.24271716604159,0,0.197611631897944,0.121792598380896,0.638341257770182,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.691743174681154,0.124980407962107,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.327130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,1.15104934173287,0.107824811396682,0,0.109209638192014,0,0.637724760305049,0.619678821295011,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0.381382095467167,0,0,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,1.98484471355718,0.175871244359621,0,0,0.336283722218824,0.606965604236632,0,0,0.115233987555779,0.171488009437418,0.135939465953663,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0.0714765441766563,1.42212250559454,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0.196300467230486,0,0,0.205325613712494,0,1.45713297917742,0.233939463462106,0.795803100645473,0,0.11294608203896,1.75904826792687,0.301925687133347,0.308696632431779,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0.25618263945135,0,0.657751618414705,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0.435050081742686,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,10.1340195901437,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0,0,0,2.06846023944879,0.291604613383254,0.347249989866585,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0.498635045700469,0,0,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0.426905989478705,0,0.144090417154106,0.114536596165916,1.02956998717179,0.288109595976299,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0.314408610199332,1.24271716604159,0,0.197611631897944,0.121792598380896,0.638341257770182,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.691743174681154,0.124980407962107,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.327130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,1.15104934173287,0.107824811396682,0,0.109209638192014,0,0.637724760305049,0.619678821295011,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0.381382095467167,0,0,0.150420656698515,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,1.98484471355718,0.175871244359621,0,0,0.336283722218824,0.606965604236632,0,0,0.115233987555779,0.171488009437418,0.135939465953663,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0.0714765441766563,1.42212250559454,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0.196300467230486,0,0,0.205325613712494,0,1.45713297917742,0.233939463462106,0.795803100645473,0,0.11294608203896,1.75904826792687,0.301925687133347,0.308696632431779,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0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| ||
|short_description=p@chr6:20988192..20988195,+ | |short_description=p@chr6:20988192..20988195,+ | ||
}} | }} |
Latest revision as of 22:36, 30 July 2015
Short description: | p@chr6:20988192..20988195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:20988192..20988195, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.63e-16 | 1 |
lower urinary tract cell | 2.63e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
penis | 7.57e-17 | 1 |
intromittent organ | 7.57e-17 | 1 |
lateral plate mesenchyme | 7.57e-17 | 1 |
undifferentiated genital tubercle | 7.57e-17 | 1 |
somatopleure | 7.57e-17 | 1 |
surface | 1.04e-16 | 1 |
lower lobe of right lung | 1.65e-16 | 1 |
right lung lobe | 1.65e-16 | 1 |
lower lobe of lung | 1.65e-16 | 1 |
lobe of lung | 1.65e-16 | 1 |
right lung | 1.65e-16 | 1 |
urinary bladder urothelium | 2.63e-16 | 1 |
wall of urinary bladder | 2.63e-16 | 1 |
mucosa of urinary bladder | 2.63e-16 | 1 |
urinary bladder | 8.09e-09 | 2 |
lower urinary tract | 8.09e-09 | 2 |