FFCP PHASE1:Hg19::chr6:21203948..21203950,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:21203948..21203950,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr6:21203948..21203950,+ | |description=CAGE_peak_at_chr6:21203948..21203950,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1001319;7.36e-18;1!CL:1000600;7.36e-18;1!CL:0000123;1.33e-09;2!CL:0000242;1.33e-09;2 | |ontology_enrichment_celltype_v019=CL:1001319;7.36e-18;1!CL:1000600;7.36e-18;1!CL:0000123;1.33e-09;2!CL:0000242;1.33e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.22e-17,1;CL:1000600,1.22e-17,1;CL:0000242,1.03e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.14e-07;3 | |ontology_enrichment_development_v019=UBERON:0003056;8.14e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.36e-18;1!UBERON:0002426;7.36e-18;1!UBERON:0003831;7.36e-18;1!UBERON:0003898;7.36e-18;1!UBERON:0004830;7.36e-18;1!UBERON:0003830;7.36e-18;1!UBERON:0005175;7.36e-18;1!UBERON:0001774;7.36e-18;1!UBERON:0001103;7.36e-18;1!UBERON:0001256;7.36e-18;1!UBERON:0001259;7.36e-18;1!UBERON:0001255;1.33e-09;2!UBERON:0005090;1.33e-09;2!UBERON:0001630;1.33e-09;2!UBERON:0001556;1.33e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0004645;7.36e-18;1!UBERON:0002426;7.36e-18;1!UBERON:0003831;7.36e-18;1!UBERON:0003898;7.36e-18;1!UBERON:0004830;7.36e-18;1!UBERON:0003830;7.36e-18;1!UBERON:0005175;7.36e-18;1!UBERON:0001774;7.36e-18;1!UBERON:0001103;7.36e-18;1!UBERON:0001256;7.36e-18;1!UBERON:0001259;7.36e-18;1!UBERON:0001255;1.33e-09;2!UBERON:0005090;1.33e-09;2!UBERON:0001630;1.33e-09;2!UBERON:0001556;1.33e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.75e-18,1;UBERON:0003831,3.75e-18,1;UBERON:0003898,3.75e-18,1;UBERON:0004830,3.75e-18,1;UBERON:0003830,3.75e-18,1;UBERON:0005175,3.75e-18,1;UBERON:0001774,3.75e-18,1;UBERON:0001103,3.75e-18,1;UBERON:0010084,3.75e-18,1;UBERON:0004645,1.22e-17,1;UBERON:0001256,1.22e-17,1;UBERON:0001259,1.22e-17,1;UBERON:0005090,9.46e-10,2;UBERON:0001630,9.46e-10,2;UBERON:0001255,1.71e-09,2;UBERON:0001556,1.71e-09,2 | |||
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| ||
|short_description=p@chr6:21203948..21203950,+ | |short_description=p@chr6:21203948..21203950,+ | ||
}} | }} |
Latest revision as of 22:36, 30 July 2015
Short description: | p@chr6:21203948..21203950, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:21203948..21203950, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.22e-17 | 1 |
lower urinary tract cell | 1.22e-17 | 1 |
Merkel cell | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.75e-18 | 1 |
respiratory system muscle | 3.75e-18 | 1 |
skeletal muscle of trunk | 3.75e-18 | 1 |
respiratory system skeletal muscle | 3.75e-18 | 1 |
thoracic segment muscle | 3.75e-18 | 1 |
chest organ | 3.75e-18 | 1 |
muscle of trunk | 3.75e-18 | 1 |
diaphragm | 3.75e-18 | 1 |
future diaphragm | 3.75e-18 | 1 |
urinary bladder urothelium | 1.22e-17 | 1 |
wall of urinary bladder | 1.22e-17 | 1 |
mucosa of urinary bladder | 1.22e-17 | 1 |
muscle structure | 9.46e-10 | 2 |
muscle organ | 9.46e-10 | 2 |
urinary bladder | 1.71e-09 | 2 |
lower urinary tract | 1.71e-09 | 2 |