FFCP PHASE1:Hg19::chr6:25600260..25600275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:25600260..25600275,+ | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_at_chr6:25600260..25600275,+ | |description=CAGE_peak_at_chr6:25600260..25600275,+ | ||
|id=chr6:25600260..25600275,+ | |id=chr6:25600260..25600275,+ | ||
|ontology_enrichment_celltype=CL:0000313;5.12e-50;1!CL:0000159;8.10e-26;2!CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | |ontology_enrichment_celltype=CL:0000313!4.61e-26!1;CL:0000159!9.40e-14!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;5.12e-50;1!CL:0000159;8.10e-26;2!CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | ||
|ontology_enrichment_disease=DOID:2152;5.12e-50;1!DOID:3001;1.50e-09;6!DOID:299;5.95e-09;25!DOID:120;2.30e-08;27!DOID:193;7.40e-08;29 | |ontology_enrichment_celltype_v019_2=CL:0000313,6.58e-50,1;CL:0000159,9.18e-26,2;CL:0002149,1.44e-09,6;CL:0002255,1.44e-09,6 | ||
|ontology_enrichment_uberon=UBERON:0004911;5.12e-50;1!UBERON:0004909;8.10e-26;2!UBERON:0002113;2.35e-09;24!UBERON:0011143;2.35e-09;24!UBERON:0000489;6.44e-08;29!UBERON:0006554;1.10e-07;30!UBERON:0001008;1.10e-07;30 | |ontology_enrichment_development_v019=UBERON:0003918;6.99e-21;10!UBERON:0007687;6.99e-21;10!UBERON:0003104;1.10e-07;31 | ||
|ontology_enrichment_disease=DOID:2152!4.61e-26!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.12e-50;1!DOID:3001;1.50e-09;6!DOID:299;5.95e-09;25!DOID:120;2.30e-08;27!DOID:193;7.40e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.58e-50,1;DOID:3001,1.44e-09,6;DOID:299,5.95e-09,25;DOID:120,2.30e-08,27;DOID:193,7.40e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0004911!4.61e-26!1;UBERON:0004909!9.40e-14!2;UBERON:0001876!1.37e-13!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.12e-50;1!UBERON:0004909;8.10e-26;2!UBERON:0002113;2.35e-09;24!UBERON:0011143;2.35e-09;24!UBERON:0000489;6.44e-08;29!UBERON:0006554;1.10e-07;30!UBERON:0001008;1.10e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.58e-50,1;UBERON:0004909,9.18e-26,2;UBERON:0002113,1.03e-08,26;UBERON:0003918,1.03e-08,26;UBERON:0011143,1.03e-08,26;UBERON:0005095,1.03e-08,26;UBERON:0007687,1.03e-08,26;UBERON:0000489,1.80e-07,31 | |||
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|short_description=p@chr6:25600260..25600275,+ | |short_description=p@chr6:25600260..25600275,+ | ||
}} | }} |
Latest revision as of 22:52, 30 July 2015
Short description: | p@chr6:25600260..25600275, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25600260..25600275, + |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.58e-50 | 1 |
seromucus secreting cell | 9.18e-26 | 2 |
epithelial cell of uterus | 1.44e-09 | 6 |
stromal cell of endometrium | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.58e-50 | 1 |
epithelium of gonad | 9.18e-26 | 2 |
kidney | 1.03e-08 | 26 |
kidney mesenchyme | 1.03e-08 | 26 |
upper urinary tract | 1.03e-08 | 26 |
kidney rudiment | 1.03e-08 | 26 |
kidney field | 1.03e-08 | 26 |
cavitated compound organ | 1.80e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.58e-50 | 1 |
female reproductive endometrioid cancer | 1.44e-09 | 6 |
adenocarcinoma | 5.95e-09 | 25 |
female reproductive organ cancer | 2.30e-08 | 27 |
reproductive organ cancer | 7.40e-08 | 29 |