FFCP PHASE1:Hg19::chr6:35213823..35213835,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:35213823..35213835,+ | |||
|description=CAGE_peak_at_chr6:35213823..35213835,+ | |description=CAGE_peak_at_chr6:35213823..35213835,+ | ||
|id=chr6:35213823..35213835,+ | |id=chr6:35213823..35213835,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.75e-20!12;CL:0000057!6.15e-12!75;CL:0000055!7.05e-10!180;CL:0002620!7.84e-09!23;CL:0002580!2.47e-08!3;CL:0000214!3.51e-08!3;CL:0002570!4.08e-08!8;CL:0002579!4.49e-08!3;CL:0000499!1.88e-07!27;CL:0000153!7.16e-07!9;CL:0000447!7.16e-07!9 | |ontology_enrichment_celltype=CL:0002334!2.75e-20!12;CL:0000057!6.15e-12!75;CL:0000055!7.05e-10!180;CL:0002620!7.84e-09!23;CL:0002580!2.47e-08!3;CL:0000214!3.51e-08!3;CL:0002570!4.08e-08!8;CL:0002579!4.49e-08!3;CL:0000499!1.88e-07!27;CL:0000153!7.16e-07!9;CL:0000447!7.16e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.38e-22;12!CL:0002583;7.98e-10;2!CL:0002617;1.57e-09;2!CL:0002570;3.70e-09;8!CL:0002521;6.69e-07;3!CL:0000346;6.69e-07;3!CL:1000428;6.69e-07;3!CL:0002580;6.69e-07;3!CL:0002582;6.69e-07;3!CL:0000135;9.11e-07;3!CL:0002567;9.11e-07;3!CL:0002579;9.11e-07;3!CL:0000388;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.82e-22,12;CL:0002583,7.98e-10,2;CL:0002617,1.44e-09,2;CL:0002570,3.70e-09,8;CL:0000346,6.14e-07,3;CL:1000428,6.14e-07,3;CL:0002521,6.50e-07,3;CL:0002580,6.88e-07,3;CL:0002582,7.28e-07,3;CL:0002567,7.70e-07,3;CL:0000135,9.12e-07,3;CL:0000388,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!2.55e-09!45;UBERON:0002416!2.55e-09!45;UBERON:0004457!3.63e-09!12;UBERON:0000042!3.63e-09!12;UBERON:0006915!3.51e-08!3;UBERON:0002018!3.51e-08!3;UBERON:0002217!3.51e-08!3;UBERON:0007616!3.51e-08!3;UBERON:0004905!4.67e-08!5;UBERON:0000982!4.67e-08!5;UBERON:0004770!4.67e-08!5 | |ontology_enrichment_uberon=UBERON:0002199!2.55e-09!45;UBERON:0002416!2.55e-09!45;UBERON:0004457!3.63e-09!12;UBERON:0000042!3.63e-09!12;UBERON:0006915!3.51e-08!3;UBERON:0002018!3.51e-08!3;UBERON:0002217!3.51e-08!3;UBERON:0007616!3.51e-08!3;UBERON:0004905!4.67e-08!5;UBERON:0000982!4.67e-08!5;UBERON:0004770!4.67e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.78e-14;5!UBERON:0001013;2.97e-11;14!UBERON:0000310;1.40e-07;10!UBERON:0001443;5.72e-07;11!UBERON:0000412;6.69e-07;3!UBERON:0002190;6.69e-07;3!UBERON:0001992;6.69e-07;3!UBERON:0007846;9.11e-07;3!UBERON:0000043;9.11e-07;3!UBERON:0007845;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.72e-14,5;UBERON:0001013,2.92e-11,14;UBERON:0000310,1.37e-07,10;UBERON:0001443,5.64e-07,11;UBERON:0000412,6.14e-07,3;UBERON:0001992,6.14e-07,3;UBERON:0002190,6.50e-07,3;UBERON:0007846,9.12e-07,3;UBERON:0000043,9.12e-07,3;UBERON:0007845,9.12e-07,3 | |||
|phase1_expression=0,1.49870366723688,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.900273288253207,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,2.24528075546459,0.128139149255701,1.02341449813341,0.160853921143607,0,5.24312958929029,0.532685175939381,0.98552587216571,0,2.20799719073923,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0.679708458751268,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,1.49870366723688,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.900273288253207,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,1.690605505112,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,2.24528075546459,0.128139149255701,1.02341449813341,0.160853921143607,0,5.24312958929029,0.532685175939381,0.98552587216571,0,2.20799719073923,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0.679708458751268,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr6:35213823..35213835,+ | |short_description=p@chr6:35213823..35213835,+ | ||
}} | }} |
Latest revision as of 00:58, 31 July 2015
Short description: | p@chr6:35213823..35213835, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35213823..35213835, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.82e-22 | 12 |
subcutaneous preadipocyte | 7.98e-10 | 2 |
adipocyte of breast | 1.44e-09 | 2 |
mesenchymal stem cell of adipose | 3.70e-09 | 8 |
hair follicle dermal papilla cell | 6.14e-07 | 3 |
stem cell of epidermis | 6.14e-07 | 3 |
subcutaneous fat cell | 6.50e-07 | 3 |
preadipocyte of the breast | 6.88e-07 | 3 |
visceral preadipocyte | 7.28e-07 | 3 |
light melanocyte | 7.70e-07 | 3 |
fibrocyte | 9.12e-07 | 3 |
tendon cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 1.72e-14 | 5 |
adipose tissue | 2.92e-11 | 14 |
breast | 1.37e-07 | 10 |
chest | 5.64e-07 | 11 |
dermal papilla | 6.14e-07 | 3 |
papillary layer of dermis | 6.14e-07 | 3 |
subcutaneous adipose tissue | 6.50e-07 | 3 |
dense regular connective tissue | 9.12e-07 | 3 |
tendon | 9.12e-07 | 3 |
regular connective tissue | 9.12e-07 | 3 |