FFCP PHASE1:Hg19::chr6:4610857..4610862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_uc010jns.1_5end | |||
|cluster_id=chr6:4610857..4610862,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_uc010jns.1_5end | |||
|id=chr6:4610857..4610862,+ | |||
|ontology_enrichment_celltype=CL:0000148!4.77e-45!10;CL:0000541!4.77e-45!10;CL:0000147!2.18e-43!14;CL:0000710!1.92e-22!20;CL:0005020!2.83e-19!6;CL:0002138!2.83e-19!6;CL:0005022!2.83e-19!6;CL:0002567!5.99e-18!3;CL:0000075!1.47e-16!27;CL:0000325!2.83e-15!39;CL:0002566!3.98e-14!1;CL:0000313!6.65e-14!1;CL:0000149!1.62e-13!4;CL:0002077!1.71e-13!33;CL:0000333!2.81e-10!41;CL:0000159!1.36e-07!2;CL:0000133!3.92e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.85e-98;10!CL:0000147;1.65e-70;14!CL:0002567;3.75e-53;3!CL:0000710;1.16e-49;20!CL:0002566;1.48e-40;1!CL:0000075;4.92e-37;27!CL:0002077;6.57e-30;34!CL:0000149;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.85e-98,10;CL:0000541,2.85e-98,10;CL:0000147,1.65e-70,14;CL:0002567,3.75e-53,3;CL:0000710,1.16e-49,20;CL:0002566,1.48e-40,1;CL:0000075,4.92e-37,27;CL:0002077,1.36e-29,34;CL:0000333,1.42e-23,41;CL:0000133,7.61e-17,59;CL:0000221,5.20e-14,72;CL:0000149,3.42e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.19e-10;59!CL:0000221;5.85e-08;72 | |||
|ontology_enrichment_disease=DOID:2152!6.65e-14!1;DOID:5662!1.83e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!1.28e-14!8;UBERON:0004536!1.28e-14!8;UBERON:0006558!1.28e-14!8;UBERON:0004911!6.65e-14!1;UBERON:0006834!7.55e-14!1;UBERON:0002465!8.12e-12!10;UBERON:0000966!7.89e-11!5;UBERON:0005388!7.89e-11!5;UBERON:0001802!7.89e-11!5;UBERON:0004909!1.36e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@uc010jns.1 | |||
}} | }} |
Latest revision as of 02:05, 31 July 2015
Short description: | p2@uc010jns.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc010jns.1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 11bp_to_uc010jns.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.85e-98 | 10 |
melanoblast | 2.85e-98 | 10 |
pigment cell | 1.65e-70 | 14 |
light melanocyte | 3.75e-53 | 3 |
neurecto-epithelial cell | 1.16e-49 | 20 |
dark melanocyte | 1.48e-40 | 1 |
columnar/cuboidal epithelial cell | 4.92e-37 | 27 |
ecto-epithelial cell | 1.36e-29 | 34 |
migratory neural crest cell | 1.42e-23 | 41 |
neurectodermal cell | 7.61e-17 | 59 |
ectodermal cell | 5.20e-14 | 72 |
visual pigment cell | 3.42e-11 | 4 |