FFCP PHASE1:Hg19::chr6:56484743..56484754,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:56484743..56484754,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56484743..56484754,- | |||
|id=chr6:56484743..56484754,- | |||
|ontology_enrichment_celltype=CL:0002076!9.90e-15!43;CL:0000223!5.16e-11!59;CL:0002251!6.43e-10!21;CL:0000066!7.60e-09!254;CL:0002623!6.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.70e-27;42!CL:0002623;2.55e-27;3!CL:0002336;2.54e-21;1!CL:0002261;2.54e-21;1!CL:0002170;2.54e-21;1!CL:0000622;7.82e-17;5!CL:0002251;2.63e-16;20!CL:0002368;2.44e-14;13!CL:0000240;3.36e-14;6!CL:0000311;3.36e-14;6!CL:0000079;3.36e-14;6!CL:0000237;3.36e-14;6!CL:0000154;3.36e-14;6!CL:0000150;8.64e-10;9!CL:0002231;4.52e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.91e-30,42;CL:0002623,1.59e-27,3;CL:0000223,1.37e-21,58;CL:0002336,2.82e-21,1;CL:0002261,2.82e-21,1;CL:0002170,2.82e-21,1;CL:0000622,5.91e-17,5;CL:0002251,2.48e-16,20;CL:0002368,2.49e-14,13;CL:0000154,2.66e-14,6;CL:0000240,3.97e-14,6;CL:0000311,3.97e-14,6;CL:0000079,3.97e-14,6;CL:0000237,3.97e-14,6;CL:0000036,3.97e-14,6;CL:0000357,3.97e-14,6;CL:0000114,3.97e-14,6;CL:0000150,7.41e-10,9;CL:0002231,4.52e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000357;3.36e-14;6!CL:0000114;3.36e-14;6!CL:0000223;1.28e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!3.94e-10!14;DOID:14566!4.11e-07!239;DOID:305!6.75e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!2.92e-10!35;UBERON:0000165!3.36e-09!28;UBERON:0000930!3.36e-09!28;UBERON:0001004!5.69e-09!72;UBERON:0004119!3.18e-08!169;UBERON:0000925!3.18e-08!169;UBERON:0006595!3.18e-08!169;UBERON:0000166!4.32e-08!21;UBERON:0003102!4.43e-08!95;UBERON:0005153!1.87e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.36e-14;6!UBERON:0003293;3.36e-14;6!UBERON:0003294;3.36e-14;6!UBERON:0010047;3.36e-14;6!UBERON:0003408;3.36e-14;6!UBERON:0000167;3.36e-14;6!UBERON:0000165;9.19e-12;28!UBERON:0000161;4.44e-10;19!UBERON:0000166;4.44e-10;19!UBERON:0003729;4.13e-07;13!UBERON:0001004;7.67e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.66e-14,6;UBERON:0003293,2.66e-14,6;UBERON:0003294,2.66e-14,6;UBERON:0010047,2.66e-14,6;UBERON:0000167,2.66e-14,6;UBERON:0000165,2.18e-11,29;UBERON:0000930,2.18e-11,29;UBERON:0001004,1.39e-09,74;UBERON:0000161,2.87e-09,36;UBERON:0003408,5.80e-09,10;UBERON:0000166,8.25e-09,22;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160;UBERON:0003102,3.76e-07,99;UBERON:0003729,4.39e-07,13;UBERON:0001444,7.27e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,1.00528972411631,2.22212268380471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,3.31491560169227,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.366277859273374,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0.384380134730212,1.02090169995667,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.455173793141999,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0.340776043570843,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,2.20114318226015,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0.47775168788705,0,0.316027223465453,0,0,0,1.86494547746733,2.7314956335032,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0.439762066981716,0,0.154348316215889,0,0.470317296361523,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,1.2498775702396,0.705789743431384,0.240724100067505,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:56484743..56484754,- | |||
}} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56484743..56484754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56484743..56484754, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.91e-30 | 42 |
acinar cell of salivary gland | 1.59e-27 | 3 |
endodermal cell | 1.37e-21 | 58 |
buccal mucosa cell | 2.82e-21 | 1 |
endothelial cell of viscerocranial mucosa | 2.82e-21 | 1 |
keratinized cell of the oral mucosa | 2.82e-21 | 1 |
acinar cell | 5.91e-17 | 5 |
epithelial cell of alimentary canal | 2.48e-16 | 20 |
respiratory epithelial cell | 2.49e-14 | 13 |
protein secreting cell | 2.66e-14 | 6 |
stratified squamous epithelial cell | 3.97e-14 | 6 |
keratin accumulating cell | 3.97e-14 | 6 |
stratified epithelial cell | 3.97e-14 | 6 |
keratinizing barrier epithelial cell | 3.97e-14 | 6 |
epithelial fate stem cell | 3.97e-14 | 6 |
stratified epithelial stem cell | 3.97e-14 | 6 |
surface ectodermal cell | 3.97e-14 | 6 |
glandular epithelial cell | 7.41e-10 | 9 |
epithelial cell of prostate | 4.52e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.66e-14 | 6 |
gland of oral region | 2.66e-14 | 6 |
gland of foregut | 2.66e-14 | 6 |
oral gland | 2.66e-14 | 6 |
oral cavity | 2.66e-14 | 6 |
mouth | 2.18e-11 | 29 |
stomodeum | 2.18e-11 | 29 |
respiratory system | 1.39e-09 | 74 |
orifice | 2.87e-09 | 36 |
gland of gut | 5.80e-09 | 10 |
oral opening | 8.25e-09 | 22 |
endoderm-derived structure | 1.54e-07 | 160 |
endoderm | 1.54e-07 | 160 |
presumptive endoderm | 1.54e-07 | 160 |
surface structure | 3.76e-07 | 99 |
mouth mucosa | 4.39e-07 | 13 |
subdivision of head | 7.27e-07 | 49 |