FFCP PHASE1:Hg19::chr6:56485093..56485108,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:56485093..56485108,-
|short_description=p@chr6:56485093..56485108,-
|description=CAGE_peak_at_chr6:56485093..56485108,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:56485093..56485108,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56485093..56485108,- | |||
|id=chr6:56485093..56485108,- | |||
|ontology_enrichment_celltype=CL:0000066!3.14e-15!254;CL:0002076!2.92e-11!43;CL:0000223!1.72e-09!59;CL:0002251!3.63e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.77e-15;42!CL:0002251;1.58e-12;20!CL:0002623;7.47e-10;3!CL:0000622;1.39e-09;5!CL:0002166;7.20e-09;3!CL:0000154;5.67e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.78e-18,42;CL:0000066,1.90e-14,253;CL:0000223,1.91e-14,58;CL:0002251,1.45e-12,20;CL:0002623,7.65e-10,3;CL:0000622,1.59e-09,5;CL:0002166,4.34e-09,3;CL:0000154,6.36e-08,6;CL:0000076,4.04e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;6.93e-08;58 | |||
|ontology_enrichment_disease=DOID:0050687!4.79e-16!143;DOID:305!1.16e-14!106;DOID:162!7.05e-11!235;DOID:14566!7.45e-11!239;DOID:1749!2.42e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.63e-17;14!DOID:1324;2.48e-07;15!DOID:0050615;8.20e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.71e-17,14;DOID:305,4.88e-08,106;DOID:1324,3.36e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.15e-08!72;UBERON:0005153!3.83e-08!37;UBERON:0000062!7.01e-08!511;UBERON:0000153!8.42e-08!129;UBERON:0007811!8.42e-08!129;UBERON:0000033!1.47e-07!123;UBERON:0000161!1.48e-07!35;UBERON:0003102!1.91e-07!95;UBERON:0000475!2.56e-07!365;UBERON:0004119!4.28e-07!169;UBERON:0000925!4.28e-07!169;UBERON:0006595!4.28e-07!169;UBERON:0004121!9.58e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;2.28e-08;19!UBERON:0000166;2.28e-08;19!UBERON:0000165;3.71e-08;28!UBERON:0004807;7.78e-08;22!UBERON:0003729;3.13e-07;13!UBERON:0003343;6.37e-07;4!UBERON:0004785;6.37e-07;4!UBERON:0001708;9.78e-07;4!UBERON:0008895;9.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,8.34e-11,74;UBERON:0003102,6.54e-09,99;UBERON:0000166,6.78e-09,22;UBERON:0000165,6.69e-08,29;UBERON:0000930,6.69e-08,29;UBERON:0004119,1.80e-07,160;UBERON:0000925,1.80e-07,160;UBERON:0006595,1.80e-07,160;UBERON:0000161,2.30e-07,36;UBERON:0003729,2.86e-07,13;UBERON:0003343,4.87e-07,4;UBERON:0004785,4.87e-07,4;UBERON:0001708,6.74e-07,4;UBERON:0008895,6.74e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0.958120975510189,0,0.382067028739756,0.492603536699674,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.527008714158756,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.529636723252875,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,1.25572744982203,0.213557388818567,0.423863802319124,0.900273288253207,0,0.515281080091258,0,1.5189869901714,0.194874010322397,1.7670364197088,0.184099797284599,0.323292113637624,0,0.10075209822764,0.339121184620975,1.35282597214308,5.18217629122586,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0.842923450390509,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,1.18157981336281,0,0,0,4.93876284338815,0,8.44443368257699,9.16625607069443,0,0,1.44331342025273,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,3.69560682037491,2.55195175036296,10.8365812470446,9.30028603244678,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.157702415033935,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.384417447767103,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,9.62431057455767,18.4161977871793,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.824125183365091,0.330037999682352,0,1.30012049207304,0,0,0,0,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0,9.91709492165869,6.3422722230485,8.42243902464255,11.4308292366771,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.848432591722276,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.673554789078584,0,0,0.188287601553558,0,0,0,5.74308500517399,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0.318852545457645,0.399158742865633,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0.593929361665277,1.84296421259539,0.994147647766298,0.703347082052564,0.445234820091624,0,0,0,0,0.503865495708552,0.20453736500431,0.861593638227486,0.311039587661807,0.269605053441981,1.25314822272926,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,3.41380344856499,1.01701460117107,1.18193840883968,0,0,0,0.885741385813839,0.60298219312704,0,1.65868889896837,0.295547618953547,0,0,5.57694977114413,0.153900517007594,0,0,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0,0.593042257361244,0.247127877893006,0,0.134802265961354,0,0.234264445725339,0,0.391329237864179,1.69946265673865,0,0,0,0,0,0,0,0,0,0,0,3.74421617135474,0,0.195984794828755,1.30588809870604,0.52418000472609,1.71986032471617,0.0967563312890851,0.0730893170861856,0,0.484945082442097,0,0.451961481561065,0.274083849293502,0,0.0633107959558787,1.56441106187842,0.160317640503067,0,0.19980960958213,0.432271251462318,0.114536596165916,0.343189995723929,0,0.869767748958028,3.06402245001834,1.35904206073614,0.313808538937,0,0,0.600420288709789,0.547621515567972,0,0.429765441419957,0,0,0.229160424011684,0,0.599037001496973,0,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0,0.13480708770837,0.492137407573744,0,0,0.817220436669454,0,0.275078873194468,0.415440338029185,0,0.77380195455795,0,2.0126081255956,0,0,0.316801009558219,1.07572403599707,1.91915197319445,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0.511164065356265,0.113312091520126,0.439656701034247,0,0.387848869084652,0,0,0,0.213574825135389,0,0,0,0,0,1.27668251554036,0,0,0,0,0.314108192500469,0,0.366078794705889,1.001527445652,0,0.110929051536852,0,2.35192679391592,0.999843263696853,0,0,0,0,0.144921028610825,0.149254802886874,0,1.10961172300523,0.189403005275089,0.754703705257725,1.77962244319307,0.686520205190771,0.302461847526478,0.15543720058278,0.443565449968902,0.477890301491107,0,0.155262956876259,0.829412415681711,0,0.521745061811734,0,0.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| ||
|short_description=p@chr6:56485093..56485108,- | |||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56485093..56485108, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56485093..56485108, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.78e-18 | 42 |
epithelial cell | 1.90e-14 | 253 |
endodermal cell | 1.91e-14 | 58 |
epithelial cell of alimentary canal | 1.45e-12 | 20 |
acinar cell of salivary gland | 7.65e-10 | 3 |
acinar cell | 1.59e-09 | 5 |
epithelial cell of Malassez | 4.34e-09 | 3 |
protein secreting cell | 6.36e-08 | 6 |
squamous epithelial cell | 4.04e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 8.34e-11 | 74 |
surface structure | 6.54e-09 | 99 |
oral opening | 6.78e-09 | 22 |
mouth | 6.69e-08 | 29 |
stomodeum | 6.69e-08 | 29 |
endoderm-derived structure | 1.80e-07 | 160 |
endoderm | 1.80e-07 | 160 |
presumptive endoderm | 1.80e-07 | 160 |
orifice | 2.30e-07 | 36 |
mouth mucosa | 2.86e-07 | 13 |
mucosa of oral region | 4.87e-07 | 4 |
respiratory system mucosa | 4.87e-07 | 4 |
jaw skeleton | 6.74e-07 | 4 |
splanchnocranium | 6.74e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.71e-17 | 14 |
carcinoma | 4.88e-08 | 106 |
lung cancer | 3.36e-07 | 15 |