FFCP PHASE1:Hg19::chr7:100806958..100806976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100806958..100806976,+ | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_at_chr7:100806958..100806976,+ | |description=CAGE_peak_at_chr7:100806958..100806976,+ | ||
|id=chr7:100806958..100806976,+ | |id=chr7:100806958..100806976,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.05e-34;1!CL:0000164;5.05e-34;1!CL:0000502;5.05e-34;1!CL:0000172;5.05e-34;1!CL:0000173;5.05e-34;1!CL:0000333;6.55e-08;5!CL:0002540;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.61e-34,1;CL:0000164,3.61e-34,1;CL:0000502,3.61e-34,1;CL:0000172,3.61e-34,1;CL:0000173,3.61e-34,1;CL:0002351,3.61e-34,1;CL:0002540,7.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;5.05e-34;1 | |||
|ontology_enrichment_disease=DOID:1909!4.56e-11!2;DOID:169!9.43e-08!6;DOID:171!1.12e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.45e-66;2!DOID:4430;5.05e-34;1!DOID:169;6.78e-23;6!DOID:171;3.47e-14;10!DOID:3095;5.57e-07;22!DOID:2994;5.57e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.03e-66,2;DOID:4430,3.61e-34,1;DOID:169,7.58e-23,6;DOID:171,3.71e-14,10;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002780!5.67e-09!41;UBERON:0001890!5.67e-09!41;UBERON:0006240!5.67e-09!41;UBERON:0001872!6.17e-09!5;UBERON:0001049!8.45e-09!57;UBERON:0005068!8.45e-09!57;UBERON:0006241!8.45e-09!57;UBERON:0007135!8.45e-09!57;UBERON:0003080!1.01e-08!42;UBERON:0002616!1.99e-08!59;UBERON:0000073!2.19e-08!94;UBERON:0001016!2.19e-08!94;UBERON:0001017!1.61e-07!82;UBERON:0002791!2.83e-07!33;UBERON:0001950!2.88e-07!20;UBERON:0002020!4.12e-07!34;UBERON:0003528!4.12e-07!34;UBERON:0005743!4.71e-07!86;UBERON:0001893!4.95e-07!34;UBERON:0000955!9.11e-07!69;UBERON:0006238!9.11e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;7.41e-10;15!UBERON:0007376;7.41e-10;15!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.75e-10,15;UBERON:0007376,7.75e-10,15;UBERON:0007383,7.75e-10,15;UBERON:0000013,7.49e-08,5;UBERON:0002410,7.49e-08,5 | |||
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|short_description=p@chr7:100806958..100806976,+ | |short_description=p@chr7:100806958..100806976,+ | ||
}} | }} |
Latest revision as of 04:20, 31 July 2015
Short description: | p@chr7:100806958..100806976, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100806958..100806976, + |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.61e-34 | 1 |
enteroendocrine cell | 3.61e-34 | 1 |
type D enteroendocrine cell | 3.61e-34 | 1 |
somatostatin secreting cell | 3.61e-34 | 1 |
pancreatic D cell | 3.61e-34 | 1 |
progenitor cell of endocrine pancreas | 3.61e-34 | 1 |
mesenchymal stem cell of the bone marrow | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 7.75e-10 | 15 |
outer epithelium | 7.75e-10 | 15 |
enveloping layer of ectoderm | 7.75e-10 | 15 |
sympathetic nervous system | 7.49e-08 | 5 |
autonomic nervous system | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.03e-66 | 2 |
somatostatinoma | 3.61e-34 | 1 |
neuroendocrine tumor | 7.58e-23 | 6 |
neuroectodermal tumor | 3.71e-14 | 10 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |