FFCP PHASE1:Hg19::chr7:100942917..100942920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000429254_5end | |association_with_transcript=23bp_to_ENST00000429254_5end | ||
|cluster_id=chr7:100942917..100942920,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_ENST00000429254_5end | |description=CAGE_peak_2_at_ENST00000429254_5end | ||
|id=chr7:100942917..100942920,+ | |id=chr7:100942917..100942920,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.57e-75!5;CL:0000039!3.66e-35!7;CL:0000586!3.66e-35!7;CL:0000540!7.24e-24!6;CL:0000031!7.24e-24!6;CL:0000404!7.24e-24!6;CL:0000047!4.43e-18!8;CL:0000148!2.55e-14!10;CL:0000541!2.55e-14!10;CL:0000147!2.10e-10!14;CL:0000133!7.76e-09!59;CL:0000710!1.90e-07!20;CL:0000221!2.46e-07!71 | |ontology_enrichment_celltype=CL:0002322!3.57e-75!5;CL:0000039!3.66e-35!7;CL:0000586!3.66e-35!7;CL:0000540!7.24e-24!6;CL:0000031!7.24e-24!6;CL:0000404!7.24e-24!6;CL:0000047!4.43e-18!8;CL:0000148!2.55e-14!10;CL:0000541!2.55e-14!10;CL:0000147!2.10e-10!14;CL:0000133!7.76e-09!59;CL:0000710!1.90e-07!20;CL:0000221!2.46e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000540;9.78e-38;6!CL:0000404;9.78e-38;6!CL:0000039;3.02e-32;7!CL:0000586;3.02e-32;7!CL:0002319;5.66e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.19e-38,6;CL:0000031,9.19e-38,6;CL:0000404,9.19e-38,6;CL:0000039,2.57e-32,7;CL:0000586,2.57e-32,7;CL:0000047,1.49e-28,8;CL:0002319,5.58e-09,25;CL:0000133,5.88e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;9.78e-38;6!UBERON:0009117;7.74e-23;10!UBERON:0005564;7.74e-23;10 | |||
|ontology_enrichment_disease=DOID:3095!2.11e-17!22;DOID:2994!2.11e-17!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.39e-18;22!DOID:2994;2.39e-18;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.39e-18,22;DOID:2994,2.39e-18,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.85e-31!8;UBERON:0003135!1.50e-22!11;UBERON:0000991!5.53e-12!21;UBERON:0009196!5.53e-12!21;UBERON:0009117!5.53e-12!21;UBERON:0005564!5.53e-12!21;UBERON:0004176!1.88e-11!22;UBERON:0003101!1.88e-11!22;UBERON:0000079!1.88e-11!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.50e-28;8!UBERON:0003135;7.75e-21;11!UBERON:0000991;2.85e-11;21!UBERON:0003101;8.62e-11;22!UBERON:0000079;8.62e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.17e-28,8;UBERON:0003135,7.00e-21,11;UBERON:0000991,2.70e-11,21;UBERON:0009196,2.70e-11,21;UBERON:0009117,2.70e-11,21;UBERON:0005564,2.70e-11,21;UBERON:0004176,8.20e-11,22;UBERON:0003101,8.20e-11,22;UBERON:0000079,8.20e-11,22 | |||
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|short_description=p2@ENST00000429254 | |short_description=p2@ENST00000429254 | ||
}} | }} |
Latest revision as of 04:23, 31 July 2015
Short description: | p2@ENST00000429254 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000429254_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 23bp_to_ENST00000429254_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.19e-38 | 6 |
neuroblast | 9.19e-38 | 6 |
electrically signaling cell | 9.19e-38 | 6 |
germ line cell | 2.57e-32 | 7 |
germ cell | 2.57e-32 | 7 |
neuronal stem cell | 1.49e-28 | 8 |
neural cell | 5.58e-09 | 25 |
neurectodermal cell | 5.88e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 2.17e-28 | 8 |
male reproductive organ | 7.00e-21 | 11 |
gonad | 2.70e-11 | 21 |
indifferent external genitalia | 2.70e-11 | 21 |
indifferent gonad | 2.70e-11 | 21 |
gonad primordium | 2.70e-11 | 21 |
external genitalia | 8.20e-11 | 22 |
male organism | 8.20e-11 | 22 |
male reproductive system | 8.20e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.39e-18 | 22 |
germ cell cancer | 2.39e-18 | 22 |