FFCP PHASE1:Hg19::chr7:107356140..107356144,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:107356140..107356144,-
|short_description=p@chr7:107356140..107356144,-
|description=CAGE_peak_at_chr7:107356140..107356144,-
|association_with_transcript=...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:107356140..107356144,- | |||
|description=CAGE_peak_at_chr7:107356140..107356144,- | |||
|id=chr7:107356140..107356144,- | |||
|ontology_enrichment_celltype=CL:0002202!2.17e-09!9;CL:0002632!2.17e-09!9;CL:0002368!1.64e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002327;8.65e-26;4!CL:0000307;1.05e-09;3!CL:0002368;1.22e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.94e-26,4;CL:0000068,1.10e-09,3;CL:0000069,1.10e-09,3;CL:0000307,1.10e-09,3;CL:0000377,1.10e-09,3;CL:0002368,1.17e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000377;1.05e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;8.65e-26;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.94e-26,4;UBERON:0005333,5.94e-26,4;UBERON:0008425,5.94e-26,4;UBERON:0005311,5.94e-26,4;UBERON:0000076,1.61e-13,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.61205340865127,2.3250715081117,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0,0,0,1.40373983744043,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75901493089674,0.158936578980379,0,0.489698424477443,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0.160317640503067,0,0,0,0,0,1.1524383839052,0,0.235694034616795,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.499921631848426,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0.337884881306145,1.02496607435179,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.61205340865127,2.3250715081117,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0,0,0,1.40373983744043,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75901493089674,0.158936578980379,0,0.489698424477443,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0.160317640503067,0,0,0,0,0,1.1524383839052,0,0.235694034616795,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.499921631848426,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0.337884881306145,1.02496607435179,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:107356140..107356144,- | |||
}} | }} |
Latest revision as of 04:54, 31 July 2015
Short description: | p@chr7:107356140..107356144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:107356140..107356144, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.94e-26 | 4 |
duct epithelial cell | 1.10e-09 | 3 |
branched duct epithelial cell | 1.10e-09 | 3 |
tracheal epithelial cell | 1.10e-09 | 3 |
tracheoblast | 1.10e-09 | 3 |
respiratory epithelial cell | 1.17e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.94e-26 | 4 |
mammary bud | 5.94e-26 | 4 |
mammary ridge | 5.94e-26 | 4 |
mammary placode | 5.94e-26 | 4 |
external ectoderm | 1.61e-13 | 8 |