FFCP PHASE1:Hg19::chr7:130983477..130983481,+: Difference between revisions
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|id=chr7:130983477..130983481,+
|short_description=p@chr7:130983477..130983481,+
|description=CAGE_peak_at_chr7:130983477..130983481,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:130983477..130983481,+ | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr7:130983477..130983481,+ | |||
|id=chr7:130983477..130983481,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.18e-12;3!CL:0000313;6.32e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.38e-13,3;CL:0000313,7.55e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.61e-08;5 | |||
|ontology_enrichment_disease=DOID:14566!1.32e-18!239;DOID:162!5.25e-18!235;DOID:0050687!3.07e-13!143;DOID:305!1.00e-11!106;DOID:0050686!2.48e-08!137;DOID:299!2.87e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4556;9.93e-13;3!DOID:3111;6.32e-10;1!DOID:2152;6.32e-10;1!DOID:3112;6.32e-10;1!DOID:3603;6.32e-10;1!DOID:3908;5.49e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,6.98e-13,3;DOID:3112,3.40e-10,1;DOID:3111,4.85e-10,1;DOID:3603,4.85e-10,1;DOID:2152,7.55e-10,1;DOID:305,3.16e-08,106;DOID:3908,4.45e-08,5;DOID:0050687,8.35e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;6.32e-10;1!UBERON:0004911;6.32e-10;1!UBERON:0002046;8.61e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.55e-10,1;UBERON:0007195,8.24e-10,1;UBERON:0002046,6.31e-08,5;UBERON:0004117,6.31e-08,5;UBERON:0007689,6.31e-08,5;UBERON:0007123,6.31e-08,5;UBERON:0003091,6.31e-08,5 | |||
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| ||
|short_description=p@chr7:130983477..130983481,+ | |||
}} | }} |
Latest revision as of 06:10, 31 July 2015
Short description: | p@chr7:130983477..130983481, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:130983477..130983481, + |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.38e-13 | 3 |
serous secreting cell | 7.55e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 7.55e-10 | 1 |
stroma of bone marrow | 8.24e-10 | 1 |
thyroid gland | 6.31e-08 | 5 |
pharyngeal pouch | 6.31e-08 | 5 |
thyroid diverticulum | 6.31e-08 | 5 |
pharyngeal pouch 2 | 6.31e-08 | 5 |
thyroid primordium | 6.31e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.98e-13 | 3 |
papillary adenocarcinoma | 3.40e-10 | 1 |
cystadenocarcinoma | 4.85e-10 | 1 |
mucinous cystadenocarcinoma | 4.85e-10 | 1 |
ovary epithelial cancer | 7.55e-10 | 1 |
carcinoma | 3.16e-08 | 106 |
non-small cell lung carcinoma | 4.45e-08 | 5 |
cell type cancer | 8.35e-07 | 143 |