FFCP PHASE1:Hg19::chr7:140482926..140482954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:140482926..140482954,- | |||
|description=CAGE_peak_at_chr7:140482926..140482954,- | |description=CAGE_peak_at_chr7:140482926..140482954,- | ||
|id=chr7:140482926..140482954,- | |id=chr7:140482926..140482954,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.99e-24;3!CL:0000047;1.08e-16;2!CL:0000094;1.67e-09;8!CL:0000511;5.30e-09;1!CL:0002625;5.30e-09;1!CL:0000216;5.30e-09;1!CL:0000081;4.93e-07;11 | |ontology_enrichment_celltype_v019=CL:0000775;1.99e-24;3!CL:0000047;1.08e-16;2!CL:0000094;1.67e-09;8!CL:0000511;5.30e-09;1!CL:0002625;5.30e-09;1!CL:0000216;5.30e-09;1!CL:0000081;4.93e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.78e-24,3;CL:0000094,1.60e-09,8;CL:0000511,3.05e-09,1;CL:0002625,3.05e-09,1;CL:0000216,3.05e-09,1;CL:0000081,4.79e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.59e-11;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.59e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.17e-14!115;UBERON:0001017!7.43e-09!82;UBERON:0005743!1.05e-08!86;UBERON:0001049!5.95e-08!57;UBERON:0005068!5.95e-08!57;UBERON:0006241!5.95e-08!57;UBERON:0007135!5.95e-08!57;UBERON:0000073!2.44e-07!94;UBERON:0001016!2.44e-07!94;UBERON:0002616!5.12e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!4.17e-14!115;UBERON:0001017!7.43e-09!82;UBERON:0005743!1.05e-08!86;UBERON:0001049!5.95e-08!57;UBERON:0005068!5.95e-08!57;UBERON:0006241!5.95e-08!57;UBERON:0007135!5.95e-08!57;UBERON:0000073!2.44e-07!94;UBERON:0001016!2.44e-07!94;UBERON:0002616!5.12e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;5.30e-09;1!UBERON:0001136;5.30e-09;1!UBERON:0001343;5.30e-09;1!UBERON:0004910;5.30e-09;1!UBERON:0004813;5.30e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0000029;5.30e-09;1!UBERON:0001136;5.30e-09;1!UBERON:0001343;5.30e-09;1!UBERON:0004910;5.30e-09;1!UBERON:0004813;5.30e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.05e-09,1;UBERON:0001343,3.05e-09,1;UBERON:0004910,3.05e-09,1;UBERON:0005154,3.05e-09,1;UBERON:0005295,3.05e-09,1;UBERON:0004813,3.05e-09,1;UBERON:0005297,3.05e-09,1;UBERON:0005294,3.05e-09,1;UBERON:0010141,3.05e-09,1;UBERON:0005891,3.05e-09,1;UBERON:0000029,4.91e-09,1 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0.768482119587302,0,0.344745680736619,0.645484683583826,1.35426486594342,0.564727018627814,0,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.552700035571697,0.289803085735052,0,0,1.04535523804977,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.538842688278752,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0.441463099414651,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0.394061520403854,0.431255149719035,0.256686072559497,1.01637849688985,2.60279707715243,0.773288812777695,0.167516265334349,0,1.49801404789436,5.9832291840805,2.07207756718018,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,1.55776328755086,0.232420756919918,0.362578348774867,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.976135183992909,0.515205058238611,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0.422215270595328,0,0,0,0,0,0,0.941438007767792,0,1.68471475667626,0,0.689170200620878,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0,0,0,0.511572370226872,0.394573622547734,0,0,0.969332746095218,0.649376687132959,0,0.520855522170466,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.241192877250816,1.52581736317083,0.552896299656123,1.77328571372128,0.438770794307945,0,0,0.846452843541768,0,0,0.718061155278177,0.217294743844016,0,0.366390373607449,0.533034776018635,0,0.156980256395025,0,0.451191321234361,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0.995261931078505,0.442287822516696,0,0.889563386041866,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0.547364367646998,0,0.242780379534093,0,0,0.61214552326098,0.189559738885464,0.901940516486955,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0.873633341210151,0,0.19351266257817,0.292357268344742,0.246346371159628,0.872901148395775,0.0882561266915003,0,0,0,0.189932387867636,0.391102765469606,0,0,0.39961921916426,0,0.114536596165916,0.171594997861965,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401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| ||
|short_description=p@chr7:140482926..140482954,- | |short_description=p@chr7:140482926..140482954,- | ||
}} | }} |
Latest revision as of 06:44, 31 July 2015
Short description: | p@chr7:140482926..140482954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:140482926..140482954, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.78e-24 | 3 |
granulocyte | 1.60e-09 | 8 |
androgen binding protein secreting cell | 3.05e-09 | 1 |
seminiferous tubule epithelial cell | 3.05e-09 | 1 |
Sertoli cell | 3.05e-09 | 1 |
blood cell | 4.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.05e-09 | 1 |
seminiferous tubule of testis | 3.05e-09 | 1 |
epithelium of male gonad | 3.05e-09 | 1 |
epithelial cord | 3.05e-09 | 1 |
sex cord | 3.05e-09 | 1 |
seminiferous tubule epithelium | 3.05e-09 | 1 |
testis sex cord | 3.05e-09 | 1 |
genital ridge | 3.05e-09 | 1 |
primitive sex cord of indifferent gonad | 3.05e-09 | 1 |
coelomic epithelium | 3.05e-09 | 1 |
lymph node | 4.91e-09 | 1 |