FFCP PHASE1:Hg19::chr7:1705417..1705429,+: Difference between revisions
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|id=chr7:1705417..1705429,+
|short_description=p@chr7:1705417..1705429,+
|description=CAGE_peak_at_chr7:1705417..1705429,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:1705417..1705429,+ | |||
|description=CAGE_peak_at_chr7:1705417..1705429,+ | |||
|id=chr7:1705417..1705429,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.49e-10!59;CL:0000333!9.01e-09!41;CL:0000221!2.68e-08!71;CL:0000148!3.07e-08!10;CL:0000541!3.07e-08!10;CL:0000055!8.12e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.05e-33;3!CL:1000428;1.05e-33;3!CL:0002559;1.62e-20;5!CL:0000047;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.56e-34,3;CL:1000428,7.56e-34,3;CL:0002559,1.33e-20,5;CL:0000133,3.59e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.01e-13;1!DOID:4549;7.01e-13;1!DOID:5861;7.01e-13;1!DOID:6496;7.01e-13;1!DOID:2513;1.96e-12;1!DOID:3451;7.60e-07;2!DOID:4159;7.60e-07;2!DOID:0060122;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-13,1;DOID:4549,7.03e-13,1;DOID:5861,7.03e-13,1;DOID:6496,7.03e-13,1;DOID:2513,3.08e-12,1;DOID:3451,9.54e-07,2;DOID:4159,9.54e-07,2;DOID:0060122,9.54e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.05e-33;3!UBERON:0001992;1.05e-33;3!UBERON:0002073;1.62e-20;5!UBERON:0002067;1.13e-11;9!UBERON:0001003;3.28e-07;15!UBERON:0007376;3.28e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.56e-34,3;UBERON:0001992,7.56e-34,3;UBERON:0002073,1.33e-20,5;UBERON:0005086,1.33e-20,5;UBERON:0002067,1.02e-11,9;UBERON:0004016,1.02e-11,9;UBERON:0010083,1.02e-11,9;UBERON:0001003,3.08e-07,15;UBERON:0007376,3.08e-07,15;UBERON:0007383,3.08e-07,15 | |||
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| ||
|short_description=p@chr7:1705417..1705429,+ | |||
}} | }} |
Latest revision as of 08:10, 31 July 2015
Short description: | p@chr7:1705417..1705429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:1705417..1705429, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.56e-34 | 3 |
stem cell of epidermis | 7.56e-34 | 3 |
hair follicle cell | 1.33e-20 | 5 |
neurectodermal cell | 3.59e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 7.56e-34 | 3 |
papillary layer of dermis | 7.56e-34 | 3 |
hair follicle | 1.33e-20 | 5 |
hair follicle placode | 1.33e-20 | 5 |
dermis | 1.02e-11 | 9 |
dermatome | 1.02e-11 | 9 |
future dermis | 1.02e-11 | 9 |
skin epidermis | 3.08e-07 | 15 |
outer epithelium | 3.08e-07 | 15 |
enveloping layer of ectoderm | 3.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-13 | 1 |
extraosseous chondrosarcoma | 7.03e-13 | 1 |
myxoid chondrosarcoma | 7.03e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-13 | 1 |
basal cell carcinoma | 3.08e-12 | 1 |
skin carcinoma | 9.54e-07 | 2 |
skin cancer | 9.54e-07 | 2 |
integumentary system cancer | 9.54e-07 | 2 |