FFCP PHASE1:Hg19::chr7:4027788..4027792,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:4027788..4027792,+
|short_description=p@chr7:4027788..4027792,+
|description=CAGE_peak_at_chr7:4027788..4027792,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:4027788..4027792,+ | |||
|coexpression_cluster_id=C1282 | |||
|description=CAGE_peak_at_chr7:4027788..4027792,+ | |||
|id=chr7:4027788..4027792,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.92e-08;2!CL:0000047;2.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.12e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.98e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.01e-15;10!DOID:3095;1.30e-08;22!DOID:2994;1.30e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.36e-15,10;DOID:3095,1.46e-08,22;DOID:2994,1.46e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-14!94;UBERON:0001016!1.14e-14!94;UBERON:0001017!1.05e-13!82;UBERON:0000924!2.79e-13!173;UBERON:0006601!2.79e-13!173;UBERON:0005743!5.12e-13!86;UBERON:0002346!1.26e-11!90;UBERON:0004121!1.90e-11!169;UBERON:0000955!2.14e-10!69;UBERON:0006238!2.14e-10!69;UBERON:0007023!2.34e-10!115;UBERON:0003075!1.54e-09!86;UBERON:0007284!1.54e-09!86;UBERON:0000153!1.94e-09!129;UBERON:0007811!1.94e-09!129;UBERON:0000033!4.50e-09!123;UBERON:0001049!8.89e-09!57;UBERON:0005068!8.89e-09!57;UBERON:0006241!8.89e-09!57;UBERON:0007135!8.89e-09!57;UBERON:0002616!6.87e-08!59;UBERON:0000956!7.58e-08!25;UBERON:0000203!7.58e-08!25;UBERON:0001893!1.05e-07!34;UBERON:0002020!1.24e-07!34;UBERON:0003528!1.24e-07!34;UBERON:0002791!2.16e-07!33;UBERON:0001869!3.07e-07!32;UBERON:0002780!4.45e-07!41;UBERON:0001890!4.45e-07!41;UBERON:0006240!4.45e-07!41;UBERON:0003080!9.99e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.88e-14;4!UBERON:0000923;8.88e-14;4!UBERON:0010316;8.88e-14;4!UBERON:0005291;8.88e-14;4!UBERON:0002050;4.96e-11;5!UBERON:0005423;4.96e-11;5!UBERON:0006947;4.70e-10;3!UBERON:0004054;4.70e-10;3!UBERON:0003135;5.42e-10;11!UBERON:0000922;4.00e-09;49!UBERON:0006955;6.92e-08;2!UBERON:0004801;6.92e-08;2!UBERON:0005904;1.20e-07;4!UBERON:0003714;1.36e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.65e-10,3;UBERON:0004054,2.65e-10,3;UBERON:0003135,3.55e-10,11;UBERON:0005904,7.85e-08,4;UBERON:0006955,9.12e-08,2;UBERON:0004801,9.12e-08,2;UBERON:0003714,1.32e-07,2 | |||
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| ||
|short_description=p@chr7:4027788..4027792,+ | |||
}} | }} |
Latest revision as of 09:59, 31 July 2015
Short description: | p@chr7:4027788..4027792, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:4027788..4027792, + |
Coexpression cluster: | C1282_small_neuroectodermal_occipital_argyrophil_neuroblastoma_aorta_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.12e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.65e-10 | 3 |
internal male genitalia | 2.65e-10 | 3 |
male reproductive organ | 3.55e-10 | 11 |
duct of male reproductive system | 7.85e-08 | 4 |
uterine epithelium | 9.12e-08 | 2 |
cervix epithelium | 9.12e-08 | 2 |
neural tissue | 1.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.36e-15 | 10 |
germ cell and embryonal cancer | 1.46e-08 | 22 |
germ cell cancer | 1.46e-08 | 22 |