FFCP PHASE1:Hg19::chr7:46799446..46799457,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000487094_5end | |||
|cluster_id=chr7:46799446..46799457,- | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_1_at_ENST00000487094_5end | |||
|id=chr7:46799446..46799457,- | |||
|ontology_enrichment_celltype=CL:0000148!2.58e-57!10;CL:0000541!2.58e-57!10;CL:0000147!7.83e-41!14;CL:0002567!2.35e-36!3;CL:0000710!1.89e-28!20;CL:0002077!4.92e-22!33;CL:0000075!6.06e-21!27;CL:0000325!1.59e-18!39;CL:0002566!1.82e-13!1;CL:0000333!6.14e-13!41;CL:0000946!9.73e-13!1;CL:0000786!9.73e-13!1;CL:0000980!9.73e-13!1;CL:0002274!3.42e-10!5;CL:0000457!3.42e-10!5;CL:0002191!3.42e-10!5;CL:0000097!3.42e-10!5;CL:0000831!3.42e-10!5;CL:0002028!3.42e-10!5;CL:0000221!1.67e-09!71;CL:0000133!6.20e-09!59;CL:0000785!5.28e-07!2;CL:0000955!5.28e-07!2;CL:0000818!5.28e-07!2;CL:0000954!5.28e-07!2;CL:0000816!5.28e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002567;4.24e-98;3!CL:0000148;7.88e-53;10!CL:0000147;5.45e-38;14!CL:0002566;2.58e-34;1!CL:0000710;7.75e-27;20!CL:0000075;4.52e-20;27!CL:0002077;2.12e-14;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.92e-98,3;CL:0000148,9.01e-53,10;CL:0000541,9.01e-53,10;CL:0000147,5.99e-38,14;CL:0002566,2.58e-34,1;CL:0000710,8.28e-27,20;CL:0000075,4.75e-20,27;CL:0002077,4.61e-16,34;CL:0000333,7.84e-13,41;CL:0000133,3.28e-09,59;CL:0000221,1.11e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000133;2.36e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!4.38e-25!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.03e-66;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.45e-66,2 | |||
|ontology_enrichment_uberon=UBERON:0006834!8.64e-13!1;UBERON:0001003!3.50e-08!14;UBERON:0007376!3.50e-08!14;UBERON:0007383!3.50e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;7.75e-10;15!UBERON:0007376;7.75e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.41e-10,15;UBERON:0007376,7.41e-10,15;UBERON:0007383,7.41e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,8.44521994085848,3.4378958300245,1.17217447210047,1.71072446022705,0.616964956219941,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5627361628726,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@ENST00000487094 | |||
}} |
Latest revision as of 10:28, 31 July 2015
Short description: | p1@ENST00000487094 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000487094_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | 0bp_to_ENST00000487094_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.92e-98 | 3 |
melanocyte | 9.01e-53 | 10 |
melanoblast | 9.01e-53 | 10 |
pigment cell | 5.99e-38 | 14 |
dark melanocyte | 2.58e-34 | 1 |
neurecto-epithelial cell | 8.28e-27 | 20 |
columnar/cuboidal epithelial cell | 4.75e-20 | 27 |
ecto-epithelial cell | 4.61e-16 | 34 |
migratory neural crest cell | 7.84e-13 | 41 |
neurectodermal cell | 3.28e-09 | 59 |
ectodermal cell | 1.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 7.41e-10 | 15 |
outer epithelium | 7.41e-10 | 15 |
enveloping layer of ectoderm | 7.41e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.45e-66 | 2 |