FFCP PHASE1:Hg19::chr7:91763652..91763654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-251bp_to_uc003ulo.1_5end | |association_with_transcript=-251bp_to_uc003ulo.1_5end | ||
|cluster_id=chr7:91763652..91763654,+ | |||
|description=CAGE_peak_3_at_uc003ulo.1_5end | |description=CAGE_peak_3_at_uc003ulo.1_5end | ||
|id=chr7:91763652..91763654,+ | |id=chr7:91763652..91763654,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.54e-18!18;CL:0000789!3.54e-18!18;CL:0002420!3.54e-18!18;CL:0002419!3.54e-18!18;CL:0000790!3.54e-18!18;CL:0000625!9.76e-14!11;CL:0000898!1.81e-13!3;CL:0000084!5.71e-13!25;CL:0000827!5.71e-13!25;CL:0000810!1.19e-10!1;CL:0000895!1.19e-10!1;CL:0002436!1.19e-10!1;CL:0002427!1.19e-10!1;CL:0002428!1.19e-10!1;CL:0002429!1.19e-10!1;CL:0002433!1.19e-10!1;CL:0002431!1.19e-10!1;CL:0002432!1.19e-10!1;CL:0000738!8.14e-09!140;CL:0000838!5.00e-08!52;CL:0000037!5.25e-08!172;CL:0000566!5.25e-08!172;CL:0000542!7.32e-08!53;CL:0000051!7.32e-08!53;CL:0002087!1.61e-07!119;CL:0000988!1.94e-07!182;CL:0000624!3.66e-07!6;CL:0002031!3.78e-07!124;CL:0002032!3.90e-07!165;CL:0000837!3.90e-07!165 | |ontology_enrichment_celltype=CL:0000791!3.54e-18!18;CL:0000789!3.54e-18!18;CL:0002420!3.54e-18!18;CL:0002419!3.54e-18!18;CL:0000790!3.54e-18!18;CL:0000625!9.76e-14!11;CL:0000898!1.81e-13!3;CL:0000084!5.71e-13!25;CL:0000827!5.71e-13!25;CL:0000810!1.19e-10!1;CL:0000895!1.19e-10!1;CL:0002436!1.19e-10!1;CL:0002427!1.19e-10!1;CL:0002428!1.19e-10!1;CL:0002429!1.19e-10!1;CL:0002433!1.19e-10!1;CL:0002431!1.19e-10!1;CL:0002432!1.19e-10!1;CL:0000738!8.14e-09!140;CL:0000838!5.00e-08!52;CL:0000037!5.25e-08!172;CL:0000566!5.25e-08!172;CL:0000542!7.32e-08!53;CL:0000051!7.32e-08!53;CL:0002087!1.61e-07!119;CL:0000988!1.94e-07!182;CL:0000624!3.66e-07!6;CL:0002031!3.78e-07!124;CL:0002032!3.90e-07!165;CL:0000837!3.90e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0002543;8.34e-18;6!CL:0000625;2.27e-10;11!CL:0000791;7.39e-07;18!CL:0000789;7.39e-07;18!CL:0002419;7.39e-07;18!CL:0000071;7.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,9.07e-18,6;CL:0000625,2.16e-10,11;CL:0000791,7.18e-07,18;CL:0000789,7.18e-07,18;CL:0002420,7.18e-07,18;CL:0002419,7.18e-07,18;CL:0000790,7.18e-07,18;CL:0000071,7.60e-07,18;CL:0002546,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;7.39e-07;18!CL:0000790;7.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001638;2.31e-12;9!UBERON:0003920;2.31e-12;9!UBERON:0004582;2.31e-12;9!UBERON:0004638;7.39e-07;18!UBERON:0001986;7.39e-07;18!UBERON:0004852;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,2.45e-12,9;UBERON:0003920,2.45e-12,9;UBERON:0004582,2.45e-12,9;UBERON:0004638,7.60e-07,18;UBERON:0001986,7.60e-07,18;UBERON:0004852,7.60e-07,18 | |||
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|short_description=p3@uc003ulo.1 | |short_description=p3@uc003ulo.1 | ||
}} | }} |
Latest revision as of 12:27, 31 July 2015
Short description: | p3@uc003ulo.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003ulo.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -251bp_to_uc003ulo.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 9.07e-18 | 6 |
CD8-positive, alpha-beta T cell | 2.16e-10 | 11 |
mature alpha-beta T cell | 7.18e-07 | 18 |
alpha-beta T cell | 7.18e-07 | 18 |
immature T cell | 7.18e-07 | 18 |
mature T cell | 7.18e-07 | 18 |
immature alpha-beta T cell | 7.18e-07 | 18 |
blood vessel endothelial cell | 7.60e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vein | 2.45e-12 | 9 |
venous blood vessel | 2.45e-12 | 9 |
venous system | 2.45e-12 | 9 |
blood vessel endothelium | 7.60e-07 | 18 |
endothelium | 7.60e-07 | 18 |
cardiovascular system endothelium | 7.60e-07 | 18 |