FFCP PHASE1:Hg19::chr8:119029396..119029403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:119029396..119029403,- | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_at_chr8:119029396..119029403,- | |description=CAGE_peak_at_chr8:119029396..119029403,- | ||
|id=chr8:119029396..119029403,- | |id=chr8:119029396..119029403,- | ||
|ontology_enrichment_celltype=CL:0002166!5.42e-36!3;CL:0002076!1.70e-16!43;CL:0002251!5.42e-14!21;CL:0002336!1.09e-12!1;CL:0002261!1.09e-12!1;CL:0002170!1.09e-12!1;CL:0000223!8.44e-12!59;CL:0000066!7.78e-10!254;CL:0002159!8.76e-09!13;CL:0000076!9.54e-09!62;CL:0002368!1.61e-08!13 | |ontology_enrichment_celltype=CL:0002166!5.42e-36!3;CL:0002076!1.70e-16!43;CL:0002251!5.42e-14!21;CL:0002336!1.09e-12!1;CL:0002261!1.09e-12!1;CL:0002170!1.09e-12!1;CL:0000223!8.44e-12!59;CL:0000066!7.78e-10!254;CL:0002159!8.76e-09!13;CL:0000076!9.54e-09!62;CL:0002368!1.61e-08!13 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.88e-30!14 | |ontology_enrichment_disease=DOID:1749!2.88e-30!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.55e-29;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.55e-29,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!7.88e-38!5;UBERON:0003343!2.02e-27!4;UBERON:0004785!2.02e-27!4;UBERON:0001708!3.45e-27!4;UBERON:0001704!3.45e-27!4;UBERON:0002090!2.33e-18!6;UBERON:0000344!5.58e-16!12;UBERON:0000997!2.06e-13!1;UBERON:0005056!2.06e-13!1;UBERON:0000974!2.38e-11!10;UBERON:0000165!1.77e-10!28;UBERON:0000930!1.77e-10!28;UBERON:0003129!2.76e-10!11;UBERON:0000166!2.49e-09!21;UBERON:0000075!8.76e-09!13;UBERON:0005944!8.76e-09!13;UBERON:0004288!8.76e-09!13;UBERON:0003089!8.76e-09!13;UBERON:0000161!2.20e-08!35;UBERON:0001004!2.36e-07!72 | |ontology_enrichment_uberon=UBERON:0003729!7.88e-38!5;UBERON:0003343!2.02e-27!4;UBERON:0004785!2.02e-27!4;UBERON:0001708!3.45e-27!4;UBERON:0001704!3.45e-27!4;UBERON:0002090!2.33e-18!6;UBERON:0000344!5.58e-16!12;UBERON:0000997!2.06e-13!1;UBERON:0005056!2.06e-13!1;UBERON:0000974!2.38e-11!10;UBERON:0000165!1.77e-10!28;UBERON:0000930!1.77e-10!28;UBERON:0003129!2.76e-10!11;UBERON:0000166!2.49e-09!21;UBERON:0000075!8.76e-09!13;UBERON:0005944!8.76e-09!13;UBERON:0004288!8.76e-09!13;UBERON:0003089!8.76e-09!13;UBERON:0000161!2.20e-08!35;UBERON:0001004!2.36e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.56e-26;4!UBERON:0004785;5.56e-26;4!UBERON:0000974;7.67e-18;6!UBERON:0003729;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.56e-26,4;UBERON:0004785,5.56e-26,4;UBERON:0000974,2.73e-11,10;UBERON:0003729,5.28e-09,13 | |||
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|short_description=p@chr8:119029396..119029403,- | |short_description=p@chr8:119029396..119029403,- | ||
}} | }} |
Latest revision as of 14:20, 31 July 2015
Short description: | p@chr8:119029396..119029403, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:119029396..119029403, - |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.56e-26 | 4 |
respiratory system mucosa | 5.56e-26 | 4 |
neck | 2.73e-11 | 10 |
mouth mucosa | 5.28e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.55e-29 | 14 |