FFCP PHASE1:Hg19::chr8:120651826..120651840,-: Difference between revisions
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|id=chr8:120651826..120651840,-
|short_description=p@chr8:120651826..120651840,-
|description=CAGE_peak_at_chr8:120651826..120651840,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:120651826..120651840,- | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_at_chr8:120651826..120651840,- | |||
|id=chr8:120651826..120651840,- | |||
|ontology_enrichment_celltype=CL:0000080!1.02e-09!6;CL:0000988!8.51e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.55e-98;1!CL:0000062;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.55e-98,1;CL:0000062,2.16e-10,11;CL:0000375,2.16e-10,11;CL:0000335,2.16e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.16e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.52e-50;2!UBERON:0002012;4.52e-50;2!UBERON:0008886;4.52e-50;2!UBERON:0010313;3.02e-11;10!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,4.52e-50,2;UBERON:0007497,4.52e-50,2;UBERON:0003643,4.52e-50,2;UBERON:0003504,4.52e-50,2;UBERON:0003469,4.52e-50,2;UBERON:0003496,4.52e-50,2;UBERON:0002012,4.52e-50,2;UBERON:0008886,4.52e-50,2;UBERON:0007303,4.52e-50,2;UBERON:0002061,4.52e-50,2;UBERON:0005432,4.52e-50,2;UBERON:0004363,4.52e-50,2;UBERON:0004145,5.96e-34,3;UBERON:0003498,5.15e-21,5;UBERON:0005985,5.15e-21,5;UBERON:0010188,9.07e-18,6;UBERON:0002539,9.07e-18,6;UBERON:0003351,9.07e-18,6;UBERON:0008816,9.07e-18,6;UBERON:0000485,2.45e-12,9;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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| ||
|short_description=p@chr8:120651826..120651840,- | |||
}} | }} |
Latest revision as of 14:25, 31 July 2015
Short description: | p@chr8:120651826..120651840, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:120651826..120651840, - |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.55e-98 | 1 |
osteoblast | 2.16e-10 | 11 |
osteoprogenitor cell | 2.16e-10 | 11 |
mesenchyme condensation cell | 2.16e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 4.52e-50 | 2 |
developing epithelial placode | 4.52e-50 | 2 |
respiratory system arterial blood vessel | 4.52e-50 | 2 |
respiratory system blood vessel | 4.52e-50 | 2 |
respiratory system artery | 4.52e-50 | 2 |
head blood vessel | 4.52e-50 | 2 |
pulmonary artery | 4.52e-50 | 2 |
pulmonary vascular system | 4.52e-50 | 2 |
pharyngeal vasculature | 4.52e-50 | 2 |
truncus arteriosus | 4.52e-50 | 2 |
aortic sac | 4.52e-50 | 2 |
pharyngeal arch artery | 4.52e-50 | 2 |
outflow tract | 5.96e-34 | 3 |
heart blood vessel | 5.15e-21 | 5 |
coronary vessel | 5.15e-21 | 5 |
protuberance | 9.07e-18 | 6 |
pharyngeal arch | 9.07e-18 | 6 |
pharyngeal epithelium | 9.07e-18 | 6 |
embryonic head | 9.07e-18 | 6 |
simple columnar epithelium | 2.45e-12 | 9 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |