FFCP PHASE1:Hg19::chr8:143814087..143814102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:143814087..143814102,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr8:143814087..143814102,- | |description=CAGE_peak_at_chr8:143814087..143814102,- | ||
|id=chr8:143814087..143814102,- | |id=chr8:143814087..143814102,- | ||
|ontology_enrichment_celltype=CL:0000244!5.85e-22!4;CL:0000731!5.85e-22!4;CL:0002076!4.21e-17!43;CL:0000066!2.43e-16!254;CL:0002541!2.12e-15!3;CL:0002159!2.31e-13!13;CL:0002327!8.59e-13!4;CL:0000223!9.87e-12!59;CL:0000317!2.71e-11!2;CL:1000448!2.71e-11!2;CL:0002308!2.71e-11!2;CL:0002140!2.71e-11!2;CL:0002368!6.17e-10!13;CL:0002251!7.21e-08!21;CL:0002166!1.02e-07!3;CL:0002231!1.02e-07!3;CL:0002621!1.80e-07!3 | |ontology_enrichment_celltype=CL:0000244!5.85e-22!4;CL:0000731!5.85e-22!4;CL:0002076!4.21e-17!43;CL:0000066!2.43e-16!254;CL:0002541!2.12e-15!3;CL:0002159!2.31e-13!13;CL:0002327!8.59e-13!4;CL:0000223!9.87e-12!59;CL:0000317!2.71e-11!2;CL:1000448!2.71e-11!2;CL:0002308!2.71e-11!2;CL:0002140!2.71e-11!2;CL:0002368!6.17e-10!13;CL:0002251!7.21e-08!21;CL:0002166!1.02e-07!3;CL:0002231!1.02e-07!3;CL:0002621!1.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;7.74e-48;4!CL:0000731;7.74e-48;4!CL:0002327;2.11e-27;4!CL:0002368;3.20e-22;13!CL:0002076;1.15e-08;42!CL:0000317;4.83e-07;2!CL:1000448;4.83e-07;2!CL:0002308;4.83e-07;2!CL:0002140;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.73e-48,4;CL:0000731,8.73e-48,4;CL:0002327,2.21e-27,4;CL:0002368,3.27e-22,13;CL:0000066,6.72e-10,253;CL:0002076,1.28e-09,42;CL:0000317,4.42e-07,2;CL:1000448,4.42e-07,2;CL:0002308,4.42e-07,2;CL:0002140,4.42e-07,2;CL:0000223,7.37e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.11e-26!5;UBERON:0005910!3.34e-22!6;UBERON:0000476!2.12e-15!3;UBERON:0000920!2.12e-15!3;UBERON:0001911!8.59e-13!4;UBERON:0005333!8.59e-13!4;UBERON:0008425!8.59e-13!4;UBERON:0005311!8.59e-13!4;UBERON:0003124!1.87e-11!7;UBERON:0002419!2.71e-11!2;UBERON:0007771!2.71e-11!2;UBERON:0003297!2.71e-11!2;UBERON:0001821!2.71e-11!2;UBERON:0003487!2.71e-11!2;UBERON:0001820!2.71e-11!2;UBERON:0005089!2.71e-11!2;UBERON:0005088!2.71e-11!2;UBERON:0001255!5.54e-11!2;UBERON:0001556!5.54e-11!2;UBERON:0000002!5.90e-08!6;UBERON:0001560!5.90e-08!6;UBERON:0006554!5.98e-08!44;UBERON:0001008!9.71e-08!45;UBERON:0004119!1.59e-07!169;UBERON:0000925!1.59e-07!169;UBERON:0006595!1.59e-07!169;UBERON:0001949!1.80e-07!3;UBERON:0003100!8.07e-07!41;UBERON:0000997!9.81e-07!1;UBERON:0005056!9.81e-07!1 | |ontology_enrichment_uberon=UBERON:0000365!1.11e-26!5;UBERON:0005910!3.34e-22!6;UBERON:0000476!2.12e-15!3;UBERON:0000920!2.12e-15!3;UBERON:0001911!8.59e-13!4;UBERON:0005333!8.59e-13!4;UBERON:0008425!8.59e-13!4;UBERON:0005311!8.59e-13!4;UBERON:0003124!1.87e-11!7;UBERON:0002419!2.71e-11!2;UBERON:0007771!2.71e-11!2;UBERON:0003297!2.71e-11!2;UBERON:0001821!2.71e-11!2;UBERON:0003487!2.71e-11!2;UBERON:0001820!2.71e-11!2;UBERON:0005089!2.71e-11!2;UBERON:0005088!2.71e-11!2;UBERON:0001255!5.54e-11!2;UBERON:0001556!5.54e-11!2;UBERON:0000002!5.90e-08!6;UBERON:0001560!5.90e-08!6;UBERON:0006554!5.98e-08!44;UBERON:0001008!9.71e-08!45;UBERON:0004119!1.59e-07!169;UBERON:0000925!1.59e-07!169;UBERON:0006595!1.59e-07!169;UBERON:0001949!1.80e-07!3;UBERON:0003100!8.07e-07!41;UBERON:0000997!9.81e-07!1;UBERON:0005056!9.81e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.28e-38;5!UBERON:0005910;4.77e-32;6!UBERON:0001911;2.11e-27;4!UBERON:0000486;3.36e-16;12!UBERON:0000997;3.14e-13;1!UBERON:0005056;3.14e-13;1!UBERON:0004176;3.14e-13;1!UBERON:0002419;4.83e-07;2!UBERON:0007771;4.83e-07;2!UBERON:0003297;4.83e-07;2!UBERON:0001821;4.83e-07;2!UBERON:0003487;4.83e-07;2!UBERON:0001820;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.51e-38,5;UBERON:0005910,5.17e-32,6;UBERON:0001911,2.21e-27,4;UBERON:0005333,2.21e-27,4;UBERON:0008425,2.21e-27,4;UBERON:0005311,2.21e-27,4;UBERON:0000076,5.05e-14,8;UBERON:0000997,2.95e-13,1;UBERON:0005056,2.95e-13,1;UBERON:0002419,4.42e-07,2;UBERON:0007771,4.42e-07,2;UBERON:0003297,4.42e-07,2;UBERON:0001821,4.42e-07,2;UBERON:0003487,4.42e-07,2;UBERON:0001820,4.42e-07,2;UBERON:0005089,4.42e-07,2;UBERON:0005088,4.42e-07,2 | |||
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|short_description=p@chr8:143814087..143814102,- | |short_description=p@chr8:143814087..143814102,- | ||
}} | }} |
Latest revision as of 15:48, 31 July 2015
Short description: | p@chr8:143814087..143814102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:143814087..143814102, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.73e-48 | 4 |
urothelial cell | 8.73e-48 | 4 |
mammary gland epithelial cell | 2.21e-27 | 4 |
respiratory epithelial cell | 3.27e-22 | 13 |
epithelial cell | 6.72e-10 | 253 |
endo-epithelial cell | 1.28e-09 | 42 |
sebum secreting cell | 4.42e-07 | 2 |
epithelial cell of sweat gland | 4.42e-07 | 2 |
epithelial cell of skin gland | 4.42e-07 | 2 |
acinar cell of sebaceous gland | 4.42e-07 | 2 |
endodermal cell | 7.37e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.51e-38 | 5 |
transitional epithelium | 5.17e-32 | 6 |
mammary gland | 2.21e-27 | 4 |
mammary bud | 2.21e-27 | 4 |
mammary ridge | 2.21e-27 | 4 |
mammary placode | 2.21e-27 | 4 |
external ectoderm | 5.05e-14 | 8 |
mammalian vulva | 2.95e-13 | 1 |
external female genitalia | 2.95e-13 | 1 |
skin gland | 4.42e-07 | 2 |
epidermis gland | 4.42e-07 | 2 |
gland of integumental system | 4.42e-07 | 2 |
sebaceous gland | 4.42e-07 | 2 |
skin sebaceous gland | 4.42e-07 | 2 |
sweat gland | 4.42e-07 | 2 |
sweat gland placode | 4.42e-07 | 2 |
sebaceous gland placode | 4.42e-07 | 2 |