FFCP PHASE1:Hg19::chr8:41121573..41121589,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:41121573..41121589,- | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_at_chr8:41121573..41121589,- | |description=CAGE_peak_at_chr8:41121573..41121589,- | ||
|id=chr8:41121573..41121589,- | |id=chr8:41121573..41121589,- | ||
|ontology_enrichment_celltype=CL:0000055!1.20e-08!180;CL:0000057!3.33e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.20e-08!180;CL:0000057!3.33e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.32e-11;3!CL:0000067;1.32e-11;3!CL:0005012;1.32e-11;3!CL:0002304;1.32e-11;3!CL:0002536;4.43e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.29e-11,3;CL:0000067,1.29e-11,3;CL:0005012,1.29e-11,3;CL:0002304,1.29e-11,3;CL:0002536,4.30e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.01e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.81e-12;3!DOID:127;7.81e-12;3!DOID:0060072;5.81e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.17e-12,3;DOID:127,8.17e-12,3;DOID:0060072,6.01e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000475!9.86e-11!365;UBERON:0000468!1.01e-09!659;UBERON:0004121!1.90e-09!169;UBERON:0001444!4.70e-09!48;UBERON:0000924!8.99e-09!173;UBERON:0006601!8.99e-09!173;UBERON:0007625!1.66e-08!11;UBERON:0000033!4.62e-08!123;UBERON:0000153!8.35e-08!129;UBERON:0007811!8.35e-08!129;UBERON:0005156!1.07e-07!59;UBERON:0000990!1.07e-07!59;UBERON:0001456!1.42e-07!21;UBERON:0003102!2.60e-07!95;UBERON:0000467!3.22e-07!625;UBERON:0000480!3.97e-07!626;UBERON:0000064!4.34e-07!219 | |ontology_enrichment_uberon=UBERON:0000475!9.86e-11!365;UBERON:0000468!1.01e-09!659;UBERON:0004121!1.90e-09!169;UBERON:0001444!4.70e-09!48;UBERON:0000924!8.99e-09!173;UBERON:0006601!8.99e-09!173;UBERON:0007625!1.66e-08!11;UBERON:0000033!4.62e-08!123;UBERON:0000153!8.35e-08!129;UBERON:0007811!8.35e-08!129;UBERON:0005156!1.07e-07!59;UBERON:0000990!1.07e-07!59;UBERON:0001456!1.42e-07!21;UBERON:0003102!2.60e-07!95;UBERON:0000467!3.22e-07!625;UBERON:0000480!3.97e-07!626;UBERON:0000064!4.34e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;9.53e-15;4!UBERON:0001778;1.32e-11;3!UBERON:0001775;1.32e-11;3!UBERON:0002203;7.96e-10;6!UBERON:0001768;7.96e-10;6!UBERON:0002200;7.96e-10;6!UBERON:0007625;5.40e-08;11!UBERON:0005406;7.65e-08;2!UBERON:0001829;9.86e-08;2!UBERON:0004089;9.86e-08;2!UBERON:0001456;2.75e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.02e-14,4;UBERON:0001778,1.29e-11,3;UBERON:0001775,1.29e-11,3;UBERON:0002203,8.30e-10,6;UBERON:0001768,8.30e-10,6;UBERON:0002200,8.30e-10,6;UBERON:0005406,5.11e-08,2;UBERON:0007625,5.64e-08,11;UBERON:0001829,8.24e-08,2;UBERON:0004089,1.77e-07,2;UBERON:0005795,7.89e-07,22;UBERON:0001456,8.04e-07,22 | |||
|phase1_expression=0,1.92690471501885,0.986680828671798,2.00146596706261,1.34088328328186,7.85104671690332,0,0,0,1.22866968250754,0,2.18441372130172,3.69273769519835,0.37129905888014,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.61560529038394,1.22400414746552,0.626909442956176,0.286235987131057,1.36874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,5.10488012685966,4.43458794925128,4.74307842742881,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.662045904066094,1.43418310374407,1.06400514659507,0,0,0,0,0,0,0,0.576175924479999,0,0.624320153660641,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0.737005903870608,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.375355559615893,1.10825646193673,0,0,0,0.113432183160021,0,0,1.69545520927649,0,0.412210116953756,0,0,0.168776332241266,1.26668106709558,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.503760491138201,0.508681776931463,0.193260853163297,0,0,0.609868530647977,1.06023814657188,0.813357600086629,0,0,1.09493207722749,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05881372358231,0.219500570817251,0,0,0,0,0,7.21656710126366,0.811512834825538,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0.542530047399471,0.623912584592421,0,0,0.234282829985426,0,0,0,0,0,0.868836144680828,0,0,0,0,0,0,3.32870879020994,0.604780586659361,0.248107807818777,0.61384789315225,0.841980283299221,0.640695746278505,0,0.321707842287215,1.48418066444991,0,0,0,2.07701771673448,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.34444334449382,1.63882051206045,1.57349297951309,0,0,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0,8.83206543664843,7.55549632393536,2.7881490806424,0,0.532306030317022,0,0.55597265731176,0,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0.487426979262569,0,0.818999468447914,0.282810863907425,1.13008116620243,1.10273068709225,2.65375590096488,1.31535265576129,1.73632660280006,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,1.00035336054936,0,0,0.628303510868405,0.108647371922008,2.55200927785536,0.549585560411174,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.617819694732514,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.661983911750998,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.962776056180637,0.83088067605837,0,0,0,0,0.709251365692784,0.524545881349981,0,0,0,0.714695326373367,0,0,11.9459912385817,4.32110745600634,12.4103196841575,0,0,0.170388021785422,1.01980882368113,0,0,0,0.26446520348538,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,1.0027595760908,0,0,0,0,0.122026264901963,0.1251909307065,1.72022758707021,0.221858103073705,0.310482014706917,0.138348634936231,0,0,1.14186133417987,0,0,0,0,0,0,0.378806010550178,0,0.889811221596536,0.915360273587694,0.151230923763239,0.466311601748341,0.295710299979268,0,0,0.465788870628778,0,1.32920857278997,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0,0.928067519756987,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0,1.41351316756705,0.38582807654183,0,0,0,0.607719912354764,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0.764467467344097,0,0,0,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,1.31017534008077,0,0,0,0,0,0,3.28954660114309,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0,0.235479278551542,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0,0,1.29068207646083,0,0,1.27016115057279,0,0.31020638566432,1.91107787795487,0.335566295393377,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0.490296643507811,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0.135982980381829,0.436350690340377,1.0580536810308,0.743990036333503,0.924351257262837,0.432626562123789,0.630832124175395,0.109265571963696,0,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0,0,0,0.435433495793923,0.684466602170562,0.134704106029175,0.0717222053926763,0.332660356546013,0,0.213454691755431,0,0,2.34640942403454,0.366724332548599,3.66206560484165,0,0.603821380773079,0 | |phase1_expression=0,1.92690471501885,0.986680828671798,2.00146596706261,1.34088328328186,7.85104671690332,0,0,0,1.22866968250754,0,2.18441372130172,3.69273769519835,0.37129905888014,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.61560529038394,1.22400414746552,0.626909442956176,0.286235987131057,1.36874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,5.10488012685966,4.43458794925128,4.74307842742881,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.662045904066094,1.43418310374407,1.06400514659507,0,0,0,0,0,0,0,0.576175924479999,0,0.624320153660641,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0.737005903870608,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.375355559615893,1.10825646193673,0,0,0,0.113432183160021,0,0,1.69545520927649,0,0.412210116953756,0,0,0.168776332241266,1.26668106709558,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.503760491138201,0.508681776931463,0.193260853163297,0,0,0.609868530647977,1.06023814657188,0.813357600086629,0,0,1.09493207722749,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05881372358231,0.219500570817251,0,0,0,0,0,7.21656710126366,0.811512834825538,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0.542530047399471,0.623912584592421,0,0,0.234282829985426,0,0,0,0,0,0.868836144680828,0,0,0,0,0,0,3.32870879020994,0.604780586659361,0.248107807818777,0.61384789315225,0.841980283299221,0.640695746278505,0,0.321707842287215,1.48418066444991,0,0,0,2.07701771673448,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.34444334449382,1.63882051206045,1.57349297951309,0,0,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0,8.83206543664843,7.55549632393536,2.7881490806424,0,0.532306030317022,0,0.55597265731176,0,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0.487426979262569,0,0.818999468447914,0.282810863907425,1.13008116620243,1.10273068709225,2.65375590096488,1.31535265576129,1.73632660280006,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,1.00035336054936,0,0,0.628303510868405,0.108647371922008,2.55200927785536,0.549585560411174,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.617819694732514,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.661983911750998,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.962776056180637,0.83088067605837,0,0,0,0,0.709251365692784,0.524545881349981,0,0,0,0.714695326373367,0,0,11.9459912385817,4.32110745600634,12.4103196841575,0,0,0.170388021785422,1.01980882368113,0,0,0,0.26446520348538,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,1.0027595760908,0,0,0,0,0.122026264901963,0.1251909307065,1.72022758707021,0.221858103073705,0.310482014706917,0.138348634936231,0,0,1.14186133417987,0,0,0,0,0,0,0.378806010550178,0,0.889811221596536,0.915360273587694,0.151230923763239,0.466311601748341,0.295710299979268,0,0,0.465788870628778,0,1.32920857278997,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0,0.928067519756987,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0,1.41351316756705,0.38582807654183,0,0,0,0.607719912354764,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0.764467467344097,0,0,0,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,1.31017534008077,0,0,0,0,0,0,3.28954660114309,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0,0.235479278551542,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0,0,1.29068207646083,0,0,1.27016115057279,0,0.31020638566432,1.91107787795487,0.335566295393377,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0.490296643507811,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0.135982980381829,0.436350690340377,1.0580536810308,0.743990036333503,0.924351257262837,0.432626562123789,0.630832124175395,0.109265571963696,0,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0,0,0,0.435433495793923,0.684466602170562,0.134704106029175,0.0717222053926763,0.332660356546013,0,0.213454691755431,0,0,2.34640942403454,0.366724332548599,3.66206560484165,0,0.603821380773079,0 | ||
|short_description=p@chr8:41121573..41121589,- | |short_description=p@chr8:41121573..41121589,- | ||
}} | }} |
Latest revision as of 18:22, 31 July 2015
Short description: | p@chr8:41121573..41121589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:41121573..41121589, - |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.29e-11 | 3 |
ciliated epithelial cell | 1.29e-11 | 3 |
multi-ciliated epithelial cell | 1.29e-11 | 3 |
non-pigmented ciliary epithelial cell | 1.29e-11 | 3 |
amniotic epithelial cell | 4.30e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.02e-14 | 4 |
ciliary epithelium | 1.29e-11 | 3 |
ciliary body | 1.29e-11 | 3 |
vasculature of eye | 8.30e-10 | 6 |
uvea | 8.30e-10 | 6 |
vasculature of head | 8.30e-10 | 6 |
perirenal fat | 5.11e-08 | 2 |
pigment epithelium of eye | 5.64e-08 | 11 |
major salivary gland | 8.24e-08 | 2 |
midface | 1.77e-07 | 2 |
embryonic uterus | 7.89e-07 | 22 |
face | 8.04e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.17e-12 | 3 |
leiomyoma | 8.17e-12 | 3 |
benign neoplasm | 6.01e-09 | 4 |