FFCP PHASE1:Hg19::chr8:90624105..90624144,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:90624105..90624144,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr8:90624105..90624144,- | |description=CAGE_peak_at_chr8:90624105..90624144,- | ||
|id=chr8:90624105..90624144,- | |id=chr8:90624105..90624144,- | ||
|ontology_enrichment_celltype=CL:0000066!2.98e-23!254;CL:0000220!4.54e-15!246;CL:0002321!1.05e-14!248;CL:0000223!5.33e-12!59;CL:0002076!2.06e-11!43;CL:0000548!2.19e-09!679;CL:0000004!2.19e-09!679;CL:0000255!2.19e-09!679;CL:0000012!4.24e-09!682;CL:0000055!7.92e-09!180;CL:0002077!9.35e-08!33;CL:0002251!3.38e-07!21;CL:0000221!7.14e-07!71 | |ontology_enrichment_celltype=CL:0000066!2.98e-23!254;CL:0000220!4.54e-15!246;CL:0002321!1.05e-14!248;CL:0000223!5.33e-12!59;CL:0002076!2.06e-11!43;CL:0000548!2.19e-09!679;CL:0000004!2.19e-09!679;CL:0000255!2.19e-09!679;CL:0000012!4.24e-09!682;CL:0000055!7.92e-09!180;CL:0002077!9.35e-08!33;CL:0002251!3.38e-07!21;CL:0000221!7.14e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.28e-13;10!CL:0002567;3.03e-12;3!CL:0000147;1.55e-09;14!CL:0002077;1.15e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.45e-13,10;CL:0000541,1.45e-13,10;CL:0002567,3.12e-12,3;CL:0002077,1.11e-09,34;CL:0000147,1.69e-09,14;CL:0000066,3.39e-08,253;CL:0002321,5.77e-08,250;CL:0000221,4.37e-07,72;CL:0000333,6.18e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.28e-14!106;DOID:0050687!2.20e-13!143;DOID:1749!9.95e-11!14;DOID:14566!1.24e-09!239;DOID:162!3.24e-08!235;DOID:7!6.05e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.58e-13;14!DOID:1909;2.15e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.45e-13,14;DOID:1909,2.29e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.02e-08!95;UBERON:0004119!2.05e-07!169;UBERON:0000925!2.05e-07!169;UBERON:0006595!2.05e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.04e-09;4!UBERON:0004785;1.04e-09;4!UBERON:0003729;2.01e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.43e-09,4;UBERON:0004785,1.43e-09,4;UBERON:0003729,2.03e-07,13;UBERON:0003102,2.65e-07,99 | |||
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| ||
|short_description=p@chr8:90624105..90624144,- | |short_description=p@chr8:90624105..90624144,- | ||
}} | }} |
Latest revision as of 20:24, 31 July 2015
Short description: | p@chr8:90624105..90624144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:90624105..90624144, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.45e-13 | 10 |
melanoblast | 1.45e-13 | 10 |
light melanocyte | 3.12e-12 | 3 |
ecto-epithelial cell | 1.11e-09 | 34 |
pigment cell | 1.69e-09 | 14 |
epithelial cell | 3.39e-08 | 253 |
embryonic cell | 5.77e-08 | 250 |
ectodermal cell | 4.37e-07 | 72 |
migratory neural crest cell | 6.18e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.43e-09 | 4 |
respiratory system mucosa | 1.43e-09 | 4 |
mouth mucosa | 2.03e-07 | 13 |
surface structure | 2.65e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.45e-13 | 14 |
melanoma | 2.29e-09 | 2 |