FFCP PHASE1:Hg19::chr9:136465122..136465132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-490bp_to_AK124587_5end | |association_with_transcript=-490bp_to_AK124587_5end | ||
|cluster_id=chr9:136465122..136465132,- | |||
|coexpression_cluster_id=C2939 | |coexpression_cluster_id=C2939 | ||
|description=CAGE_peak_2_at_AK124587_5end | |description=CAGE_peak_2_at_AK124587_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | |ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | |ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | ||
|ontology_enrichment_disease=DOID:171!5.98e-12!10 | |ontology_enrichment_disease=DOID:171!5.98e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001950!5.55e-55!20;UBERON:0001869!4.10e-52!32;UBERON:0002619!5.31e-50!22;UBERON:0001893!5.74e-49!34;UBERON:0002791!2.86e-44!33;UBERON:0000956!5.78e-44!25;UBERON:0000203!5.78e-44!25;UBERON:0002020!6.32e-43!34;UBERON:0003528!6.32e-43!34;UBERON:0002780!2.60e-40!41;UBERON:0001890!2.60e-40!41;UBERON:0006240!2.60e-40!41;UBERON:0003080!2.65e-39!42;UBERON:0001049!2.75e-36!57;UBERON:0005068!2.75e-36!57;UBERON:0006241!2.75e-36!57;UBERON:0007135!2.75e-36!57;UBERON:0002616!5.77e-35!59;UBERON:0000955!1.11e-32!69;UBERON:0006238!1.11e-32!69;UBERON:0000200!4.33e-29!6;UBERON:0000073!1.28e-28!94;UBERON:0001016!1.28e-28!94;UBERON:0002346!1.24e-27!90;UBERON:0001017!4.52e-27!82;UBERON:0003056!2.46e-26!61;UBERON:0005743!1.12e-25!86;UBERON:0001872!3.03e-23!5;UBERON:0003075!4.64e-23!86;UBERON:0007284!4.64e-23!86;UBERON:0001871!3.13e-22!7;UBERON:0002771!7.18e-22!3;UBERON:0000924!3.01e-19!173;UBERON:0006601!3.01e-19!173;UBERON:0000033!4.22e-19!123;UBERON:0000153!4.71e-18!129;UBERON:0007811!4.71e-18!129;UBERON:0007023!1.46e-16!115;UBERON:0004121!4.31e-16!169;UBERON:0002021!1.51e-13!5;UBERON:0003112!1.37e-08!1;UBERON:0000032!1.37e-08!1;UBERON:0005253!1.37e-08!1;UBERON:0003128!1.37e-08!1;UBERON:0002241!1.37e-08!1;UBERON:0001703!1.37e-08!1;UBERON:0004761!1.37e-08!1;UBERON:0009617!1.37e-08!1;UBERON:0002022!1.84e-08!1;UBERON:0007190!2.13e-08!1;UBERON:0000025!2.21e-08!194;UBERON:0001882!2.46e-08!1;UBERON:0005403!2.46e-08!1;UBERON:0002902!3.53e-08!1;UBERON:0009899!3.53e-08!1;UBERON:0002581!3.79e-08!1;UBERON:0000369!5.06e-08!4;UBERON:0002435!5.06e-08!4;UBERON:0000204!5.06e-08!4;UBERON:0010082!5.06e-08!4;UBERON:0002420!1.03e-07!9;UBERON:0007245!1.03e-07!9;UBERON:0010009!1.03e-07!9;UBERON:0010011!1.03e-07!9;UBERON:0000454!1.03e-07!9;UBERON:0000064!4.83e-07!219;UBERON:0000013!9.70e-07!5;UBERON:0002410!9.70e-07!5 | |ontology_enrichment_uberon=UBERON:0001950!5.55e-55!20;UBERON:0001869!4.10e-52!32;UBERON:0002619!5.31e-50!22;UBERON:0001893!5.74e-49!34;UBERON:0002791!2.86e-44!33;UBERON:0000956!5.78e-44!25;UBERON:0000203!5.78e-44!25;UBERON:0002020!6.32e-43!34;UBERON:0003528!6.32e-43!34;UBERON:0002780!2.60e-40!41;UBERON:0001890!2.60e-40!41;UBERON:0006240!2.60e-40!41;UBERON:0003080!2.65e-39!42;UBERON:0001049!2.75e-36!57;UBERON:0005068!2.75e-36!57;UBERON:0006241!2.75e-36!57;UBERON:0007135!2.75e-36!57;UBERON:0002616!5.77e-35!59;UBERON:0000955!1.11e-32!69;UBERON:0006238!1.11e-32!69;UBERON:0000200!4.33e-29!6;UBERON:0000073!1.28e-28!94;UBERON:0001016!1.28e-28!94;UBERON:0002346!1.24e-27!90;UBERON:0001017!4.52e-27!82;UBERON:0003056!2.46e-26!61;UBERON:0005743!1.12e-25!86;UBERON:0001872!3.03e-23!5;UBERON:0003075!4.64e-23!86;UBERON:0007284!4.64e-23!86;UBERON:0001871!3.13e-22!7;UBERON:0002771!7.18e-22!3;UBERON:0000924!3.01e-19!173;UBERON:0006601!3.01e-19!173;UBERON:0000033!4.22e-19!123;UBERON:0000153!4.71e-18!129;UBERON:0007811!4.71e-18!129;UBERON:0007023!1.46e-16!115;UBERON:0004121!4.31e-16!169;UBERON:0002021!1.51e-13!5;UBERON:0003112!1.37e-08!1;UBERON:0000032!1.37e-08!1;UBERON:0005253!1.37e-08!1;UBERON:0003128!1.37e-08!1;UBERON:0002241!1.37e-08!1;UBERON:0001703!1.37e-08!1;UBERON:0004761!1.37e-08!1;UBERON:0009617!1.37e-08!1;UBERON:0002022!1.84e-08!1;UBERON:0007190!2.13e-08!1;UBERON:0000025!2.21e-08!194;UBERON:0001882!2.46e-08!1;UBERON:0005403!2.46e-08!1;UBERON:0002902!3.53e-08!1;UBERON:0009899!3.53e-08!1;UBERON:0002581!3.79e-08!1;UBERON:0000369!5.06e-08!4;UBERON:0002435!5.06e-08!4;UBERON:0000204!5.06e-08!4;UBERON:0010082!5.06e-08!4;UBERON:0002420!1.03e-07!9;UBERON:0007245!1.03e-07!9;UBERON:0010009!1.03e-07!9;UBERON:0010011!1.03e-07!9;UBERON:0000454!1.03e-07!9;UBERON:0000064!4.83e-07!219;UBERON:0000013!9.70e-07!5;UBERON:0002410!9.70e-07!5 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0001872,1.83e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p2@AK124587 | |short_description=p2@AK124587 | ||
}} | }} |
Latest revision as of 23:59, 31 July 2015
Short description: | p2@AK124587 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK124587_5end |
Coexpression cluster: | C2939_neuroblastoma_middle_occipital_parietal_medial_olfactory_smallcell |
Association with transcript: | -490bp_to_AK124587_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
parietal lobe | 1.83e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |