FFCP PHASE1:Hg19::chr9:137720172..137720183,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137720172..137720183,+ | |||
|coexpression_cluster_id=C1097 | |coexpression_cluster_id=C1097 | ||
|description=CAGE_peak_at_chr9:137720172..137720183,+ | |description=CAGE_peak_at_chr9:137720172..137720183,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!3.64e-09!23;CL:0000057!7.92e-08!75 | |ontology_enrichment_celltype=CL:0002620!3.64e-09!23;CL:0000057!7.92e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.60e-14;23!CL:0000197;9.25e-10;6!CL:0000098;9.25e-10;6!CL:0002167;9.25e-10;6 | |ontology_enrichment_celltype_v019=CL:0002620;1.60e-14;23!CL:0000197;9.25e-10;6!CL:0000098;9.25e-10;6!CL:0002167;9.25e-10;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.67e-14,23;CL:0000197,7.42e-10,6;CL:0000098,7.42e-10,6;CL:0002167,7.42e-10,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.03e-11;5!DOID:450;1.03e-11;5!DOID:66;1.03e-11;5!DOID:423;1.03e-11;5!DOID:0080000;1.03e-11;5!DOID:11722;1.03e-11;5 | |ontology_enrichment_disease_v019=DOID:17;1.03e-11;5!DOID:450;1.03e-11;5!DOID:66;1.03e-11;5!DOID:423;1.03e-11;5!DOID:0080000;1.03e-11;5!DOID:11722;1.03e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.09e-11,5;DOID:450,1.09e-11,5;DOID:66,1.09e-11,5;DOID:423,1.09e-11,5;DOID:0080000,1.09e-11,5;DOID:11722,1.09e-11,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.35e-08;2!UBERON:0002757;6.35e-08;2!UBERON:0010134;6.35e-08;2!UBERON:0005408;6.35e-08;2!UBERON:0001899;6.35e-08;2!UBERON:0002097;7.23e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001905;6.35e-08;2!UBERON:0002757;6.35e-08;2!UBERON:0010134;6.35e-08;2!UBERON:0005408;6.35e-08;2!UBERON:0001899;6.35e-08;2!UBERON:0002097;7.23e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.08e-08,41;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0002199,3.18e-07,46;UBERON:0002416,3.18e-07,46 | |||
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| ||
|short_description=p@chr9:137720172..137720183,+ | |short_description=p@chr9:137720172..137720183,+ | ||
}} | }} |
Latest revision as of 00:07, 1 August 2015
Short description: | p@chr9:137720172..137720183, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137720172..137720183, + |
Coexpression cluster: | C1097_Fibroblast_Preadipocyte_Smooth_Olfactory_mesenchymal_mesothelioma_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.67e-14 | 23 |
receptor cell | 7.42e-10 | 6 |
sensory epithelial cell | 7.42e-10 | 6 |
olfactory epithelial cell | 7.42e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.08e-08 | 41 |
pineal body | 9.19e-08 | 2 |
regional part of epithalamus | 9.19e-08 | 2 |
secretory circumventricular organ | 9.19e-08 | 2 |
circumventricular organ | 9.19e-08 | 2 |
epithalamus | 9.19e-08 | 2 |
integument | 3.18e-07 | 46 |
integumental system | 3.18e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.09e-11 | 5 |
myotonic disease | 1.09e-11 | 5 |
muscle tissue disease | 1.09e-11 | 5 |
myopathy | 1.09e-11 | 5 |
muscular disease | 1.09e-11 | 5 |
myotonic dystrophy | 1.09e-11 | 5 |