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FFCP PHASE1:Hg19::chr9:139652754..139652761,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=138307
|EntrezGene=entrezgene:138307
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=27038
|HGNC=HGNC:27038
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=Q6JVE9,Q6ZT51
|UniProt=uniprot:Q6JVE9,uniprot:Q6ZT51
|association_with_transcript=-23bp_to_NM_178469,uc004cjb.1,uc004cjc.1_5end
|association_with_transcript=-23bp_to_NM_178469,uc004cjb.1,uc004cjc.1_5end
|cluster_id=chr9:139652754..139652761,-
|coexpression_cluster_id=C39
|coexpression_cluster_id=C39
|description=CAGE_peak_10_at_LCN8_5end
|description=CAGE_peak_10_at_LCN8_5end

Revision as of 00:23, 1 August 2015

Short description:p10@LCN8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_10_at_LCN8_5end
Coexpression cluster:C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133
Association with transcript: -23bp_to_NM_178469, uc004cjb.1, uc004cjc.1_5end
EntrezGene:138307
HGNC: 27038
UniProt: Q6JVE9Q6ZT51
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data