FFCP PHASE1:Hg19::chrX:152753062..152753074,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:152753062..152753074,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chrX:152753062..152753074,- | |description=CAGE_peak_at_chrX:152753062..152753074,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.05e-34;1!CL:0002569;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0000222;3.05e-34;1!CL:0002569;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002569,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.38e-33;4!UBERON:0007284;1.38e-33;4!UBERON:0006965;7.05e-18;2 | |ontology_enrichment_development_v019=UBERON:0005062;1.38e-33;4!UBERON:0007284;1.38e-33;4!UBERON:0006965;7.05e-18;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!5.44e-07!3;UBERON:0009751!5.44e-07!3;UBERON:0000946!5.44e-07!3;UBERON:0002523!5.44e-07!3;UBERON:0005983!5.44e-07!3;UBERON:0002165!5.44e-07!3;UBERON:0002062!5.44e-07!3;UBERON:0007280!5.44e-07!3 | |ontology_enrichment_uberon=UBERON:0003978!5.44e-07!3;UBERON:0009751!5.44e-07!3;UBERON:0000946!5.44e-07!3;UBERON:0002523!5.44e-07!3;UBERON:0005983!5.44e-07!3;UBERON:0002165!5.44e-07!3;UBERON:0002062!5.44e-07!3;UBERON:0007280!5.44e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.38e-44;3!UBERON:0000946;2.38e-44;3!UBERON:0002135;7.05e-34;1!UBERON:0002146;7.05e-34;1!UBERON:0005623;7.05e-34;1!UBERON:0002133;1.07e-17;2!UBERON:0010313;3.97e-14;10!UBERON:0000948;5.91e-07;22!UBERON:0003422;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003978;2.38e-44;3!UBERON:0000946;2.38e-44;3!UBERON:0002135;7.05e-34;1!UBERON:0002146;7.05e-34;1!UBERON:0005623;7.05e-34;1!UBERON:0002133;1.07e-17;2!UBERON:0010313;3.97e-14;10!UBERON:0000948;5.91e-07;22!UBERON:0003422;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.91e-44,3;UBERON:0009751,1.91e-44,3;UBERON:0000946,1.91e-44,3;UBERON:0002523,1.91e-44,3;UBERON:0005983,1.91e-44,3;UBERON:0002165,1.91e-44,3;UBERON:0002062,1.91e-44,3;UBERON:0007280,1.91e-44,3;UBERON:0002135,5.05e-34,1;UBERON:0002146,7.06e-34,1;UBERON:0005623,7.06e-34,1;UBERON:0004797,9.49e-20,7;UBERON:0002133,9.07e-18,2;UBERON:0010313,3.71e-14,10;UBERON:0002342,3.71e-14,10;UBERON:0005062,3.71e-14,10;UBERON:0003422,9.49e-07,6 | |||
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| ||
|short_description=p@chrX:152753062..152753074,- | |short_description=p@chrX:152753062..152753074,- | ||
}} | }} |
Latest revision as of 06:44, 1 August 2015
Short description: | p@chrX:152753062..152753074, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:152753062..152753074, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
valve | 1.91e-44 | 3 |
cardiac mesenchyme | 1.91e-44 | 3 |
cardial valve | 1.91e-44 | 3 |
tunica intima | 1.91e-44 | 3 |
heart layer | 1.91e-44 | 3 |
endocardium | 1.91e-44 | 3 |
endocardial cushion | 1.91e-44 | 3 |
presumptive endocardium | 1.91e-44 | 3 |
mitral valve | 5.05e-34 | 1 |
pulmonary valve | 7.06e-34 | 1 |
semi-lunar valve | 7.06e-34 | 1 |
blood vessel layer | 9.49e-20 | 7 |
atrioventricular valve | 9.07e-18 | 2 |
neural crest-derived structure | 3.71e-14 | 10 |
neural crest | 3.71e-14 | 10 |
neural fold | 3.71e-14 | 10 |
mesenchyme of umbilical cord | 9.49e-07 | 6 |