FFCP PHASE1:Hg19::chrX:3240093..3240112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=405bp_to_BC172854_5end | |association_with_transcript=405bp_to_BC172854_5end | ||
|cluster_id=chrX:3240093..3240112,- | |||
|coexpression_cluster_id=C551 | |||
|description=CAGE_peak_2_at_BC172854_5end | |description=CAGE_peak_2_at_BC172854_5end | ||
|id=chrX:3240093..3240112,- | |id=chrX:3240093..3240112,- | ||
|ontology_enrichment_celltype=CL:0002620!1.25e-10!23;CL:0000057!3.51e-08!75 | |ontology_enrichment_celltype=CL:0002620!1.25e-10!23;CL:0000057!3.51e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.67e-19;23!CL:0002580;2.42e-18;3!CL:0000135;2.05e-17;3!CL:0000388;2.05e-17;3!CL:0002334;4.73e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.65e-19,23;CL:0002580,2.36e-18,3;CL:0000135,8.01e-18,3;CL:0000388,8.01e-18,3;CL:0000057,3.85e-16,76;CL:0002334,4.65e-08,12;CL:0000134,3.16e-07,354;CL:0002320,5.62e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.16e-08!5;DOID:450!1.16e-08!5;DOID:66!1.16e-08!5;DOID:423!1.16e-08!5;DOID:0080000!1.16e-08!5;DOID:11722!1.16e-08!5;DOID:2394!1.11e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;7.01e-19;5!DOID:450;7.01e-19;5!DOID:66;7.01e-19;5!DOID:423;7.01e-19;5!DOID:0080000;7.01e-19;5!DOID:11722;7.01e-19;5!DOID:2394;1.86e-10;14!DOID:120;2.60e-07;27!DOID:2513;6.30e-07;1!DOID:3369;6.30e-07;1!DOID:193;9.13e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.72e-19,5;DOID:450,7.72e-19,5;DOID:66,7.72e-19,5;DOID:423,7.72e-19,5;DOID:0080000,7.72e-19,5;DOID:11722,7.72e-19,5;DOID:2394,1.94e-10,14;DOID:120,2.81e-07,27;DOID:3369,3.60e-07,1;DOID:2513,6.12e-07,1;DOID:193,9.81e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.89e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.05e-17;3!UBERON:0000043;2.05e-17;3!UBERON:0007845;2.05e-17;3!UBERON:0002199;1.13e-10;46!UBERON:0002416;1.13e-10;46!UBERON:0002097;2.74e-10;41!UBERON:0000310;1.64e-09;10!UBERON:0001443;1.18e-08;11!UBERON:0003102;2.16e-07;50!UBERON:0001282;2.75e-07;1!UBERON:0009842;2.75e-07;1!UBERON:0003704;2.75e-07;1!UBERON:0001171;2.75e-07;1!UBERON:0001172;2.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,8.01e-18,3;UBERON:0000043,8.01e-18,3;UBERON:0007845,8.01e-18,3;UBERON:0002097,5.52e-15,41;UBERON:0002199,3.94e-13,46;UBERON:0002416,3.94e-13,46;UBERON:0000310,1.47e-09,10;UBERON:0001443,1.07e-08,11;UBERON:0002384,2.07e-07,371;UBERON:0001282,2.23e-07,1;UBERON:0009842,2.23e-07,1;UBERON:0003704,2.23e-07,1;UBERON:0001171,2.23e-07,1;UBERON:0001172,2.23e-07,1 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,2.33206526395521,4.91181994282705,1.05965950579781,1.80054657650641,0.618315175430633,2.06112432036503,0.930584281657949,0,0.292311015483596,3.28163906517349,1.19664868234989,1.2931684545505,3.55009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,3.57656445851882,0,2.6593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.946214490203608,0,0,0,0,0,0,0.173767228936166,0,0.686286847621712,0,0,0,0,0,0,1.48864684691266,2.14846762603287,4.2099014164961,0.384417447767103,2.55853624533352,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.534192213880424,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921482106297696,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,1.11538995422883,0.230850775511391,2.96249345202203,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0.195984794828755,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0.866851769704557,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0.318593534327405,0,1.08684069813382,0,3.98762571836992,0,13.072411982758,2.66563648518157,0.406870733204662,0.181848659202559,2.47044281197723,0.928067519756987,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0.6828739083758,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,1.0580536810308,1.85997509083376,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0.808468755832877,0.217716747896961,0,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0.54503513781167,1.49870366723688,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,2.33206526395521,4.91181994282705,1.05965950579781,1.80054657650641,0.618315175430633,2.06112432036503,0.930584281657949,0,0.292311015483596,3.28163906517349,1.19664868234989,1.2931684545505,3.55009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,3.57656445851882,0,2.6593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.946214490203608,0,0,0,0,0,0,0.173767228936166,0,0.686286847621712,0,0,0,0,0,0,1.48864684691266,2.14846762603287,4.2099014164961,0.384417447767103,2.55853624533352,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.534192213880424,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921482106297696,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,1.11538995422883,0.230850775511391,2.96249345202203,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0.195984794828755,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0.866851769704557,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0.318593534327405,0,1.08684069813382,0,3.98762571836992,0,13.072411982758,2.66563648518157,0.406870733204662,0.181848659202559,2.47044281197723,0.928067519756987,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0.6828739083758,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,1.0580536810308,1.85997509083376,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0.808468755832877,0.217716747896961,0,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p2@BC172854 | |short_description=p2@BC172854 | ||
}} | }} |
Latest revision as of 07:48, 1 August 2015
Short description: | p2@BC172854 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC172854_5end |
Coexpression cluster: | C551_mesenchymal_cholangiocellular_Fibroblast_Mesothelial_Preadipocyte_cervical_Chondrocyte |
Association with transcript: | 405bp_to_BC172854_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.65e-19 | 23 |
preadipocyte of the breast | 2.36e-18 | 3 |
fibrocyte | 8.01e-18 | 3 |
tendon cell | 8.01e-18 | 3 |
fibroblast | 3.85e-16 | 76 |
preadipocyte | 4.65e-08 | 12 |
mesenchymal cell | 3.16e-07 | 354 |
connective tissue cell | 5.62e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 8.01e-18 | 3 |
tendon | 8.01e-18 | 3 |
regular connective tissue | 8.01e-18 | 3 |
skin of body | 5.52e-15 | 41 |
integument | 3.94e-13 | 46 |
integumental system | 3.94e-13 | 46 |
breast | 1.47e-09 | 10 |
chest | 1.07e-08 | 11 |
connective tissue | 2.07e-07 | 371 |
intralobular bile duct | 2.23e-07 | 1 |
acinus | 2.23e-07 | 1 |
intrahepatic bile duct | 2.23e-07 | 1 |
portal lobule | 2.23e-07 | 1 |
hepatic acinus | 2.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.72e-19 | 5 |
myotonic disease | 7.72e-19 | 5 |
muscle tissue disease | 7.72e-19 | 5 |
myopathy | 7.72e-19 | 5 |
muscular disease | 7.72e-19 | 5 |
myotonic dystrophy | 7.72e-19 | 5 |
ovarian cancer | 1.94e-10 | 14 |
female reproductive organ cancer | 2.81e-07 | 27 |
peripheral primitive neuroectodermal tumor | 3.60e-07 | 1 |
basal cell carcinoma | 6.12e-07 | 1 |
reproductive organ cancer | 9.81e-07 | 29 |