FFCP PHASE1:Mm9::chr5:28359435..28359464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:28359435..28359464,+ | |||
|description=CAGE_peak_at_chr5:28359435..28359464,+ | |description=CAGE_peak_at_chr5:28359435..28359464,+ | ||
|id=chr5:28359435..28359464,+ | |id=chr5:28359435..28359464,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.12e-08!5;CL:0000417!5.12e-08!5;CL:0000668!5.12e-08!5;CL:0000412!5.12e-08!5;CL:0000182!5.12e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.50e-14,1;CL:0000632,6.50e-14,1;CL:0000182,4.98e-11,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.51e-25!22;UBERON:0007499!7.51e-25!22;UBERON:0006925!7.51e-25!22;UBERON:0009497!7.51e-25!22;UBERON:0000015!7.51e-25!22;UBERON:0002423!7.51e-25!22;UBERON:0006235!7.51e-25!22;UBERON:0008835!7.51e-25!22;UBERON:0003894!7.51e-25!22;UBERON:0004161!7.51e-25!22;UBERON:0008836!7.51e-25!22;UBERON:0009854!1.12e-23!23;UBERON:0009856!1.12e-23!23;UBERON:0002365!1.30e-21!25;UBERON:0002330!1.30e-21!25;UBERON:0003914!1.75e-10!47;UBERON:0005256!1.75e-10!47;UBERON:0005172!5.74e-10!49;UBERON:0005173!5.74e-10!49;UBERON:0002417!5.74e-10!49;UBERON:0000916!5.74e-10!49;UBERON:0005057!1.72e-09!51;UBERON:0003929!1.21e-08!55;UBERON:0002368!9.65e-08!60;UBERON:0002530!5.58e-07!65;UBERON:0000490!7.67e-07!66;UBERON:0009569!7.67e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.73e-28,22;UBERON:0007499,6.73e-28,22;UBERON:0006925,6.73e-28,22;UBERON:0009497,6.73e-28,22;UBERON:0000015,6.73e-28,22;UBERON:0002423,6.73e-28,22;UBERON:0006235,6.73e-28,22;UBERON:0008835,6.73e-28,22;UBERON:0003894,6.73e-28,22;UBERON:0004161,6.73e-28,22;UBERON:0008836,6.73e-28,22;UBERON:0009854,1.06e-26,23;UBERON:0009856,1.06e-26,23;UBERON:0002365,1.35e-24,25;UBERON:0002330,1.35e-24,25;UBERON:0005256,8.60e-14,45;UBERON:0003914,3.25e-13,47;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0003929,2.55e-11,55;UBERON:0002368,2.18e-10,60;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0002530,1.34e-09,65;UBERON:0000490,1.86e-09,66;UBERON:0009569,1.86e-09,66;UBERON:0005911,4.75e-09,69;UBERON:0000949,1.12e-08,72;UBERON:0005177,6.48e-08,79;UBERON:0001041,8.13e-08,80;UBERON:0002100,5.94e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,0,1.61910957491345,5.84798775702902,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,1.11642284300551,0.624075346229121,3.28352541331245,4.30553792452589,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,0,1.61910957491345,5.84798775702902,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,1.11642284300551,0.624075346229121,3.28352541331245,4.30553792452589,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:28359435..28359464,+ | |short_description=p@chr5:28359435..28359464,+ | ||
}} | }} |
Latest revision as of 05:56, 4 August 2015
Short description: | p@chr5:28359435..28359464, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:28359435..28359464, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.50e-14 | 1 |
hepatic stellate cell | 6.50e-14 | 1 |
hepatocyte | 4.98e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 6.73e-28 | 22 |
epithelial sac | 6.73e-28 | 22 |
digestive gland | 6.73e-28 | 22 |
epithelium of foregut-midgut junction | 6.73e-28 | 22 |
anatomical boundary | 6.73e-28 | 22 |
hepatobiliary system | 6.73e-28 | 22 |
foregut-midgut junction | 6.73e-28 | 22 |
hepatic diverticulum | 6.73e-28 | 22 |
liver primordium | 6.73e-28 | 22 |
septum transversum | 6.73e-28 | 22 |
liver bud | 6.73e-28 | 22 |
digestive tract diverticulum | 1.06e-26 | 23 |
sac | 1.06e-26 | 23 |
exocrine gland | 1.35e-24 | 25 |
exocrine system | 1.35e-24 | 25 |
trunk mesenchyme | 8.60e-14 | 45 |
epithelial tube | 3.25e-13 | 47 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
gut epithelium | 2.55e-11 | 55 |
endocrine gland | 2.18e-10 | 60 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
gland | 1.34e-09 | 65 |
unilaminar epithelium | 1.86e-09 | 66 |
subdivision of trunk | 1.86e-09 | 66 |
endo-epithelium | 4.75e-09 | 69 |
endocrine system | 1.12e-08 | 72 |
trunk region element | 6.48e-08 | 79 |
foregut | 8.13e-08 | 80 |
trunk | 5.94e-07 | 90 |