FFCP PHASE1:Mm9::chr8:88039627..88039671,+: Difference between revisions
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{{FFCP|EntrezGene=108682|HGNC=|MCL_coexpression_id=14|UniProt=|association_with_transcript=-204bp_to_ENSMUST00000140189_5end|description=CAGE_peak_2_at_Gpt2_5end|id=chr8:88039627..88039671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!5.47e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.70e-14,22;UBERON:0000014,4.00e-10,5;UBERON:0001003,4.00e-10,5;UBERON:0002097,4.00e-10,5;UBERON:0002199,4.00e-10,5;UBERON:0007029,4.00e-10,5;UBERON:0007376,4.00e-10,5;UBERON:0002416,4.00e-10,5;UBERON:0007383,4.00e-10,5;UBERON:0005418,9.01e-08,5;UBERON:0002472,9.01e-08,5;UBERON:0008784,9.01e-08,5;UBERON:0006058,9.01e-08,5;UBERON:0004709,9.01e-08,5;UBERON:0002529,9.01e-08,5;UBERON:0010538,9.01e-08,5;UBERON:0005420,9.01e-08,5;UBERON:0010758,9.01e-08,5;UBERON:0000978,9.01e-08,5;UBERON:0002103,9.01e-08,5;UBERON:0000376,9.01e-08,5;UBERON:0000154,9.01e-08,5;UBERON:0010709,9.01e-08,5;UBERON:0005730,9.01e-08,5;UBERON:0010707,9.39e-08,13|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,1.39912375625629,0.157731082679119,0.137114433605739,0.84877930359606,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,4.69434806608824,0,0,0.194429899074283,3.21968769738334,0,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,11.9377757111989,0,0,0,0,0,0,0,0,0,0,2.16949371466214,2.58937883647172,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,7.66304399976559,0.433798070759735,8.84610551949874,0.647067399789637,2.65009822152472,5.33362778448744,0,0,0,0,0,0,0,0,2.28750301409313,0.125654352112864,0.869121600961382,1.02286182932132,0.41557608911912,0,0.407357455401265,9.57933673697716,1.26361379216837,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.408218994907967,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0.278047249225598,3.48252166522167,3.08673204611915,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0,0,0,0.146199987425332,0.439100230582101,0,0.210289948564127,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0,0.449724224769707,0,0.482354319504834,1.01850340712568,0.863088412352432,2.43202840162553,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,148.705376123376,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.943025398779491,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,0,0.36012218806262,0.258717367565509,0.214337035031592,0.886701168211368,0.713475270408282,1.15184314421485,1.2178597964584,6.33613611772018,0,0.661585194164886,2.96795255294664,1.29171541356724,1.99032652262914,1.67121281604391,1.80554989719567,0,0.556275906031529,0,0.412773735926445,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0,0,0.954670618015114,0,0.203319467126849,1.29606408986162,1.67270636811575,0.87345025498471,0.539457385539283,0.330613822901344,0.785267825952089,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.314578033277133,0.483168241652012,19.5860404255349,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.15241361331,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,5.8949899739955,0,0,0.335769232728157,0.386379188064381,0.750729901804728,0,20.5793643915903,0.501572104035363,1.12950368523413,0,1.14579102687879,0.68741272937475,2.05524755931193,0,0,1.35096360967266,0.906284817968409,0,0.31136204275253,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,0.448176066834085,0.402048282689293,0,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0,0.789209134313529,0.271608227691724,1.12228454331548,0.593175090620871,0.197008964751127,1.22769312950907,0.154936841185966,0.578719832943424,1.74867404556562,2.33931608445408,0.644613162144895,1.3390183244819,1.10295709559758,0.463735671240843|short_description=p2@Gpt2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108682 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-204bp_to_ENSMUST00000140189_5end | |||
|cluster_id=chr8:88039627..88039671,+ | |||
|description=CAGE_peak_2_at_Gpt2_5end | |||
|id=chr8:88039627..88039671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.47e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.70e-14,22;UBERON:0000014,4.00e-10,5;UBERON:0001003,4.00e-10,5;UBERON:0002097,4.00e-10,5;UBERON:0002199,4.00e-10,5;UBERON:0007029,4.00e-10,5;UBERON:0007376,4.00e-10,5;UBERON:0002416,4.00e-10,5;UBERON:0007383,4.00e-10,5;UBERON:0005418,9.01e-08,5;UBERON:0002472,9.01e-08,5;UBERON:0008784,9.01e-08,5;UBERON:0006058,9.01e-08,5;UBERON:0004709,9.01e-08,5;UBERON:0002529,9.01e-08,5;UBERON:0010538,9.01e-08,5;UBERON:0005420,9.01e-08,5;UBERON:0010758,9.01e-08,5;UBERON:0000978,9.01e-08,5;UBERON:0002103,9.01e-08,5;UBERON:0000376,9.01e-08,5;UBERON:0000154,9.01e-08,5;UBERON:0010709,9.01e-08,5;UBERON:0005730,9.01e-08,5;UBERON:0010707,9.39e-08,13 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,1.39912375625629,0.157731082679119,0.137114433605739,0.84877930359606,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,4.69434806608824,0,0,0.194429899074283,3.21968769738334,0,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,11.9377757111989,0,0,0,0,0,0,0,0,0,0,2.16949371466214,2.58937883647172,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.376999773989026,7.66304399976559,0.433798070759735,8.84610551949874,0.647067399789637,2.65009822152472,5.33362778448744,0,0,0,0,0,0,0,0,2.28750301409313,0.125654352112864,0.869121600961382,1.02286182932132,0.41557608911912,0,0.407357455401265,9.57933673697716,1.26361379216837,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.408218994907967,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0.278047249225598,3.48252166522167,3.08673204611915,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0,0,0,0.146199987425332,0.439100230582101,0,0.210289948564127,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0,0.449724224769707,0,0.482354319504834,1.01850340712568,0.863088412352432,2.43202840162553,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,148.705376123376,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.943025398779491,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,0,0.36012218806262,0.258717367565509,0.214337035031592,0.886701168211368,0.713475270408282,1.15184314421485,1.2178597964584,6.33613611772018,0,0.661585194164886,2.96795255294664,1.29171541356724,1.99032652262914,1.67121281604391,1.80554989719567,0,0.556275906031529,0,0.412773735926445,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0,0,0.954670618015114,0,0.203319467126849,1.29606408986162,1.67270636811575,0.87345025498471,0.539457385539283,0.330613822901344,0.785267825952089,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.314578033277133,0.483168241652012,19.5860404255349,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.15241361331,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,5.8949899739955,0,0,0.335769232728157,0.386379188064381,0.750729901804728,0,20.5793643915903,0.501572104035363,1.12950368523413,0,1.14579102687879,0.68741272937475,2.05524755931193,0,0,1.35096360967266,0.906284817968409,0,0.31136204275253,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,0.448176066834085,0.402048282689293,0,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0,0.789209134313529,0.271608227691724,1.12228454331548,0.593175090620871,0.197008964751127,1.22769312950907,0.154936841185966,0.578719832943424,1.74867404556562,2.33931608445408,0.644613162144895,1.3390183244819,1.10295709559758,0.463735671240843 | |||
|short_description=p2@Gpt2 | |||
}} |
Revision as of 07:02, 4 August 2015
Short description: | p2@Gpt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | -204bp_to_ENSMUST00000140189_5end |
EntrezGene: | 108682 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 2.70e-14 | 22 |
zone of skin | 4.00e-10 | 5 |
skin epidermis | 4.00e-10 | 5 |
skin of body | 4.00e-10 | 5 |
integument | 4.00e-10 | 5 |
surface | 4.00e-10 | 5 |
outer epithelium | 4.00e-10 | 5 |
integumental system | 4.00e-10 | 5 |
enveloping layer of ectoderm | 4.00e-10 | 5 |
hindlimb bud | 9.01e-08 | 5 |
stylopod | 9.01e-08 | 5 |
lower limb segment | 9.01e-08 | 5 |
multi-limb segment region | 9.01e-08 | 5 |
pelvic appendage | 9.01e-08 | 5 |
limb segment | 9.01e-08 | 5 |
paired limb/fin segment | 9.01e-08 | 5 |
pelvic appendage bud | 9.01e-08 | 5 |
subdivision of organism along appendicular axis | 9.01e-08 | 5 |
leg | 9.01e-08 | 5 |
hindlimb | 9.01e-08 | 5 |
hindlimb stylopod | 9.01e-08 | 5 |
posterior region of body | 9.01e-08 | 5 |
pelvic complex | 9.01e-08 | 5 |
hindlimb/pelvic fin field | 9.01e-08 | 5 |
appendage girdle complex | 9.39e-08 | 13 |