FFCP PHASE1:Mm9::chr5:32270354..32270364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:32270354..32270364,- | |||
|description=CAGE_peak_at_chr5:32270354..32270364,- | |description=CAGE_peak_at_chr5:32270354..32270364,- | ||
|id=chr5:32270354..32270364,- | |id=chr5:32270354..32270364,- | ||
|ontology_enrichment_celltype=CL:0002563!1.09e-28!9;CL:0002251!1.09e-28!9;CL:0000239!4.55e-17!6;CL:0000677!4.55e-17!6;CL:0000212!4.55e-17!6;CL:0000584!4.55e-17!6;CL:0002076!9.14e-17!15;CL:0000066!8.04e-15!25;CL:0000075!1.33e-14!7;CL:0002250!1.80e-13!3;CL:0000223!2.77e-12!20 | |ontology_enrichment_celltype=CL:0002563!1.09e-28!9;CL:0002251!1.09e-28!9;CL:0000239!4.55e-17!6;CL:0000677!4.55e-17!6;CL:0000212!4.55e-17!6;CL:0000584!4.55e-17!6;CL:0002076!9.14e-17!15;CL:0000066!8.04e-15!25;CL:0000075!1.33e-14!7;CL:0002250!1.80e-13!3;CL:0000223!2.77e-12!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.10e-52,3;CL:0002563,1.47e-48,9;CL:0002251,1.47e-48,9;CL:0002076,1.68e-29,15;CL:0000223,2.48e-22,20;CL:0000066,5.10e-18,25;CL:0000239,1.41e-12,6;CL:0000677,1.41e-12,6;CL:0000584,1.41e-12,6;CL:0000075,6.26e-11,7;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.50e-31!15;UBERON:0001242!3.05e-30!13;UBERON:0000060!3.05e-30!13;UBERON:0001262!3.05e-30!13;UBERON:0004786!3.05e-30!13;UBERON:0003350!1.09e-28!9;UBERON:0004808!1.09e-28!9;UBERON:0001277!1.09e-28!9;UBERON:0000485!2.84e-23!11;UBERON:0004923!1.39e-22!24;UBERON:0000160!1.05e-09!43;UBERON:0005409!2.68e-09!59;UBERON:0003134!1.20e-07!8;UBERON:0003975!2.73e-07!5;UBERON:0000474!8.28e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.47e-48,9;UBERON:0004808,1.47e-48,9;UBERON:0001277,1.47e-48,9;UBERON:0000485,6.64e-40,11;UBERON:0001242,6.63e-34,13;UBERON:0001262,6.63e-34,13;UBERON:0004786,6.63e-34,13;UBERON:0000344,1.68e-29,15;UBERON:0004923,9.72e-19,24;UBERON:0000160,1.14e-14,31;UBERON:0005409,6.83e-10,47;UBERON:0003929,1.55e-08,55;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0.697950815278722,2.72999543633722,0,2.00358291978539,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91763712426868,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0.886922042621219,0,0,0,8.37669697278696,1.32987716286794,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,2.72999543633722,0,2.00358291978539,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91763712426868,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0.886922042621219,0,0,0,8.37669697278696,1.32987716286794,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:32270354..32270364,- | |short_description=p@chr5:32270354..32270364,- | ||
}} | }} |
Latest revision as of 07:25, 4 August 2015
Short description: | p@chr5:32270354..32270364, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:32270354..32270364, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.10e-52 | 3 |
intestinal epithelial cell | 1.47e-48 | 9 |
epithelial cell of alimentary canal | 1.47e-48 | 9 |
endo-epithelial cell | 1.68e-29 | 15 |
endodermal cell | 2.48e-22 | 20 |
epithelial cell | 5.10e-18 | 25 |
brush border epithelial cell | 1.41e-12 | 6 |
gut absorptive cell | 1.41e-12 | 6 |
enterocyte | 1.41e-12 | 6 |
columnar/cuboidal epithelial cell | 6.26e-11 | 7 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.47e-48 | 9 |
gastrointestinal system epithelium | 1.47e-48 | 9 |
intestinal epithelium | 1.47e-48 | 9 |
simple columnar epithelium | 6.64e-40 | 11 |
intestinal mucosa | 6.63e-34 | 13 |
wall of intestine | 6.63e-34 | 13 |
gastrointestinal system mucosa | 6.63e-34 | 13 |
mucosa | 1.68e-29 | 15 |
organ component layer | 9.72e-19 | 24 |
intestine | 1.14e-14 | 31 |
gastrointestinal system | 6.83e-10 | 47 |
gut epithelium | 1.55e-08 | 55 |
unilaminar epithelium | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |