FFCP PHASE1:Mm9::chr11:96805087..96805098,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=103711|HGNC=|MCL_coexpression_id=1604|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153896_5end|description=CAGE_peak_3_at_Pnpo_5end|id=chr11:96805087..96805098,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!1.23e-13!23;UBERON:0009856!1.23e-13!23;UBERON:0002107!3.65e-13!22;UBERON:0007499!3.65e-13!22;UBERON:0006925!3.65e-13!22;UBERON:0009497!3.65e-13!22;UBERON:0000015!3.65e-13!22;UBERON:0002423!3.65e-13!22;UBERON:0006235!3.65e-13!22;UBERON:0008835!3.65e-13!22;UBERON:0003894!3.65e-13!22;UBERON:0004161!3.65e-13!22;UBERON:0008836!3.65e-13!22;UBERON:0002365!1.10e-10!25;UBERON:0002330!1.10e-10!25;UBERON:0001007!4.22e-10!128;UBERON:0001555!4.22e-10!128;UBERON:0007026!4.22e-10!128;UBERON:0004119!6.06e-10!130;UBERON:0000925!6.06e-10!130;UBERON:0006595!6.06e-10!130;UBERON:0005409!1.01e-09!59;UBERON:0004921!1.19e-09!126;UBERON:0004185!1.19e-09!126;UBERON:0004923!8.22e-08!24;UBERON:0005172!2.60e-07!49;UBERON:0005173!2.60e-07!49;UBERON:0002417!2.60e-07!49;UBERON:0000916!2.60e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.32e-17,23;UBERON:0009856,2.32e-17,23;UBERON:0005409,6.12e-17,47;UBERON:0002107,9.89e-17,22;UBERON:0007499,9.89e-17,22;UBERON:0006925,9.89e-17,22;UBERON:0009497,9.89e-17,22;UBERON:0000015,9.89e-17,22;UBERON:0002423,9.89e-17,22;UBERON:0006235,9.89e-17,22;UBERON:0008835,9.89e-17,22;UBERON:0003894,9.89e-17,22;UBERON:0004161,9.89e-17,22;UBERON:0008836,9.89e-17,22;UBERON:0004119,1.36e-15,118;UBERON:0000925,1.36e-15,118;UBERON:0006595,1.36e-15,118;UBERON:0001007,1.43e-15,116;UBERON:0001555,1.43e-15,116;UBERON:0007026,1.43e-15,116;UBERON:0004921,6.35e-15,114;UBERON:0002365,1.61e-14,25;UBERON:0002330,1.61e-14,25;UBERON:0000160,7.45e-14,31;UBERON:0004923,1.31e-09,24;UBERON:0000344,4.68e-08,15;UBERON:0003929,6.54e-08,55;UBERON:0005172,9.53e-08,49;UBERON:0005173,9.53e-08,49;UBERON:0002417,9.53e-08,49;UBERON:0000916,9.53e-08,49;UBERON:0001242,1.36e-07,13;UBERON:0001262,1.36e-07,13;UBERON:0004786,1.36e-07,13|phase1_expression=0.320297694209588,4.88565570695105,3.18499467572675,6.95667686005709,6.51164448930251,1.51091344720701,1.16806320297763,0.645616617207881,4.78681655315667,2.80877431586392,0.171217968225505,0.0797721589953364,0.171200729931206,0.611942816932982,2.33176833270964,2.83465374345756,7.69518065940961,0.315462165358238,0,0,0.425216450755349,0,0,1.59992422793407,1.60586496747019,1.14846392823004,0.86152399231815,3.878482188346,8.17100703662408,3.52842181663903,3.32595765982957,0,1.23012957516914,0,1.1554064790051,1.49611180822643,1.83752420636132,0,0,0,3.52938892818609,1.36609096991689,0.971020706062307,0,0,0,0,0,0.219686182734472,0,0,0,0.503347818173209,0.725362142011344,2.01656279485478,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.441737081903227,0.122490799214954,0,0,2.20231761998777,0.638436690425939,1.22885226604995,0.263772575460388,0.0914876436024097,0,0.558365998002762,3.37657566019008,0.916789486660861,0.294628585473668,0,0.186399445825301,0.075726193333184,0,0.289864488701678,5.16254326188832,6.11974200336975,5.93673510801599,11.0461990966104,6.2723764193627,2.52799956237153,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,3.76806803072898,0,0.593768556259299,1.38788261412909,0.608930956624282,0.922461989024234,0.452167921657868,0.940709657085638,0.125666591329675,0.988779870937496,0,0.884610551949874,0.970601099684455,1.54589062922275,2.42437626567611,3.72783522436244,0.585561594023094,0.83778682725382,3.83185582812887,0.359445373517761,1.19980546198682,0.381210681219194,0.449371918214468,1.37250180845588,0.251308704225729,0.869121600961382,0.767146371990992,0.83115217823824,1.1356888414743,0.203678727700633,1.7416975885413,0.505445516867349,0,0.260240885925407,0,0.180062129805349,0.753524089178575,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0.828503090142008,0.469052119962192,0.36012412292203,1.42046841351126,0.196764231747404,0.771335564436891,0.465067889500816,0,0.700592054203017,0,0.492502392237286,0.0810688095458557,0.877199924551994,0.658650345873152,0,0.630869845692382,0,6.93879444265976,1.05780226665418,0.213288250535234,0.232236671860439,1.03093969057675,1.61346819698674,2.2237804384487,4.1849637744763,3.79623249235609,4.28217282282428,2.26201687920243,5.37182474511107,2.53453313254856,4.49409704327111,6.05186539649144,2.38969527905241,0,0.571242563048644,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.123397163921801,9.19003143970162,10.5112416601139,17.1006325748487,19.1132795527126,19.8802918960733,20.7412357387078,20.8793198460764,9.78166867332756,14.5921704097532,7.13859674289012,4.31304619582064,3.34926852901653,2.49630138491648,3.53610429125956,3.04975602987251,8.68398338454061,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,1.95133647857799,1.10344600874334,1.10732344824387,0.159454768657487,1.3109065177259,0.172684981865896,0.578596234326046,0,0,0,1.10374698521893,0.481651769963376,0.820481806145422,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0.709700426041343,0.890328018336276,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,1.55056975900933,0.363533729477506,0,0,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0.214337035031592,0.354680467284547,0.713475270408282,0.658196082408484,0,0,1.90648863777438,0.441056796109924,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0.492422699235184,4.08073171281791,0.927126510052548,1.02522528478712,1.44470807574256,7.22258656741876,6.40452753815949,4.37421528707281,2.51655990527175,1.01987057996313,0.139951452323658,0.829199842826543,2.86401185404534,0.316335993581135,0.406638934253697,0.972048067396211,0.836353184057875,1.52853794622324,2.69728692769641,2.47960367176008,2.09404753587224,11.1468877030942,0,1.12738587736838,0.448549638131936,1.32366792365678,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.643105137237198,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,0,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,0,0.207574695168353,1.19707462020309,3.41467211508268,4.86213434136588,3.98265008993166,1.10306105070008,3.55594764482584,1.44224540067226,3.20919209591815,3.03236654116557,2.5347929989024,1.32038438970253,1.21733959710847,2.11283002936069,2.41228969613576,0.476293691283074,1.39061191133827,2.89363830695558,2.06042950401653,1.47198920134397,2.05721551431249,2.12970967391205,1.90748951957857,1.45346416632329,1.88218760830661,2.19997980518359,1.46342378298218,2.10455769150274,1.90125759384206,3.92799590160417,2.72860541685601,1.28055827088233,1.63692417267876,2.01417893541756,1.92906610981141,0.249810577937946,1.63752125911786,1.93383948643468,0.382576664137687,1.10295709559758,0.695603506861264|short_description=p3@Pnpo}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:103711 | |||
|HGNC= | |||
|MCL_coexpression_id=1604 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000153896_5end | |||
|cluster_id=chr11:96805087..96805098,- | |||
|description=CAGE_peak_3_at_Pnpo_5end | |||
|id=chr11:96805087..96805098,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.23e-13!23;UBERON:0009856!1.23e-13!23;UBERON:0002107!3.65e-13!22;UBERON:0007499!3.65e-13!22;UBERON:0006925!3.65e-13!22;UBERON:0009497!3.65e-13!22;UBERON:0000015!3.65e-13!22;UBERON:0002423!3.65e-13!22;UBERON:0006235!3.65e-13!22;UBERON:0008835!3.65e-13!22;UBERON:0003894!3.65e-13!22;UBERON:0004161!3.65e-13!22;UBERON:0008836!3.65e-13!22;UBERON:0002365!1.10e-10!25;UBERON:0002330!1.10e-10!25;UBERON:0001007!4.22e-10!128;UBERON:0001555!4.22e-10!128;UBERON:0007026!4.22e-10!128;UBERON:0004119!6.06e-10!130;UBERON:0000925!6.06e-10!130;UBERON:0006595!6.06e-10!130;UBERON:0005409!1.01e-09!59;UBERON:0004921!1.19e-09!126;UBERON:0004185!1.19e-09!126;UBERON:0004923!8.22e-08!24;UBERON:0005172!2.60e-07!49;UBERON:0005173!2.60e-07!49;UBERON:0002417!2.60e-07!49;UBERON:0000916!2.60e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.32e-17,23;UBERON:0009856,2.32e-17,23;UBERON:0005409,6.12e-17,47;UBERON:0002107,9.89e-17,22;UBERON:0007499,9.89e-17,22;UBERON:0006925,9.89e-17,22;UBERON:0009497,9.89e-17,22;UBERON:0000015,9.89e-17,22;UBERON:0002423,9.89e-17,22;UBERON:0006235,9.89e-17,22;UBERON:0008835,9.89e-17,22;UBERON:0003894,9.89e-17,22;UBERON:0004161,9.89e-17,22;UBERON:0008836,9.89e-17,22;UBERON:0004119,1.36e-15,118;UBERON:0000925,1.36e-15,118;UBERON:0006595,1.36e-15,118;UBERON:0001007,1.43e-15,116;UBERON:0001555,1.43e-15,116;UBERON:0007026,1.43e-15,116;UBERON:0004921,6.35e-15,114;UBERON:0002365,1.61e-14,25;UBERON:0002330,1.61e-14,25;UBERON:0000160,7.45e-14,31;UBERON:0004923,1.31e-09,24;UBERON:0000344,4.68e-08,15;UBERON:0003929,6.54e-08,55;UBERON:0005172,9.53e-08,49;UBERON:0005173,9.53e-08,49;UBERON:0002417,9.53e-08,49;UBERON:0000916,9.53e-08,49;UBERON:0001242,1.36e-07,13;UBERON:0001262,1.36e-07,13;UBERON:0004786,1.36e-07,13 | |||
|phase1_expression=0.320297694209588,4.88565570695105,3.18499467572675,6.95667686005709,6.51164448930251,1.51091344720701,1.16806320297763,0.645616617207881,4.78681655315667,2.80877431586392,0.171217968225505,0.0797721589953364,0.171200729931206,0.611942816932982,2.33176833270964,2.83465374345756,7.69518065940961,0.315462165358238,0,0,0.425216450755349,0,0,1.59992422793407,1.60586496747019,1.14846392823004,0.86152399231815,3.878482188346,8.17100703662408,3.52842181663903,3.32595765982957,0,1.23012957516914,0,1.1554064790051,1.49611180822643,1.83752420636132,0,0,0,3.52938892818609,1.36609096991689,0.971020706062307,0,0,0,0,0,0.219686182734472,0,0,0,0.503347818173209,0.725362142011344,2.01656279485478,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.441737081903227,0.122490799214954,0,0,2.20231761998777,0.638436690425939,1.22885226604995,0.263772575460388,0.0914876436024097,0,0.558365998002762,3.37657566019008,0.916789486660861,0.294628585473668,0,0.186399445825301,0.075726193333184,0,0.289864488701678,5.16254326188832,6.11974200336975,5.93673510801599,11.0461990966104,6.2723764193627,2.52799956237153,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,3.76806803072898,0,0.593768556259299,1.38788261412909,0.608930956624282,0.922461989024234,0.452167921657868,0.940709657085638,0.125666591329675,0.988779870937496,0,0.884610551949874,0.970601099684455,1.54589062922275,2.42437626567611,3.72783522436244,0.585561594023094,0.83778682725382,3.83185582812887,0.359445373517761,1.19980546198682,0.381210681219194,0.449371918214468,1.37250180845588,0.251308704225729,0.869121600961382,0.767146371990992,0.83115217823824,1.1356888414743,0.203678727700633,1.7416975885413,0.505445516867349,0,0.260240885925407,0,0.180062129805349,0.753524089178575,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0.828503090142008,0.469052119962192,0.36012412292203,1.42046841351126,0.196764231747404,0.771335564436891,0.465067889500816,0,0.700592054203017,0,0.492502392237286,0.0810688095458557,0.877199924551994,0.658650345873152,0,0.630869845692382,0,6.93879444265976,1.05780226665418,0.213288250535234,0.232236671860439,1.03093969057675,1.61346819698674,2.2237804384487,4.1849637744763,3.79623249235609,4.28217282282428,2.26201687920243,5.37182474511107,2.53453313254856,4.49409704327111,6.05186539649144,2.38969527905241,0,0.571242563048644,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.123397163921801,9.19003143970162,10.5112416601139,17.1006325748487,19.1132795527126,19.8802918960733,20.7412357387078,20.8793198460764,9.78166867332756,14.5921704097532,7.13859674289012,4.31304619582064,3.34926852901653,2.49630138491648,3.53610429125956,3.04975602987251,8.68398338454061,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,1.95133647857799,1.10344600874334,1.10732344824387,0.159454768657487,1.3109065177259,0.172684981865896,0.578596234326046,0,0,0,1.10374698521893,0.481651769963376,0.820481806145422,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0.709700426041343,0.890328018336276,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,1.55056975900933,0.363533729477506,0,0,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0.214337035031592,0.354680467284547,0.713475270408282,0.658196082408484,0,0,1.90648863777438,0.441056796109924,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0.492422699235184,4.08073171281791,0.927126510052548,1.02522528478712,1.44470807574256,7.22258656741876,6.40452753815949,4.37421528707281,2.51655990527175,1.01987057996313,0.139951452323658,0.829199842826543,2.86401185404534,0.316335993581135,0.406638934253697,0.972048067396211,0.836353184057875,1.52853794622324,2.69728692769641,2.47960367176008,2.09404753587224,11.1468877030942,0,1.12738587736838,0.448549638131936,1.32366792365678,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.643105137237198,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,0,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,0,0.207574695168353,1.19707462020309,3.41467211508268,4.86213434136588,3.98265008993166,1.10306105070008,3.55594764482584,1.44224540067226,3.20919209591815,3.03236654116557,2.5347929989024,1.32038438970253,1.21733959710847,2.11283002936069,2.41228969613576,0.476293691283074,1.39061191133827,2.89363830695558,2.06042950401653,1.47198920134397,2.05721551431249,2.12970967391205,1.90748951957857,1.45346416632329,1.88218760830661,2.19997980518359,1.46342378298218,2.10455769150274,1.90125759384206,3.92799590160417,2.72860541685601,1.28055827088233,1.63692417267876,2.01417893541756,1.92906610981141,0.249810577937946,1.63752125911786,1.93383948643468,0.382576664137687,1.10295709559758,0.695603506861264 | |||
|short_description=p3@Pnpo | |||
}} |
Revision as of 10:59, 4 August 2015
Short description: | p3@Pnpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pnpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:1604 |
Association with transcript: | 0bp_to_ENSMUST00000153896_5end |
EntrezGene: | 103711 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.32e-17 | 23 |
sac | 2.32e-17 | 23 |
gastrointestinal system | 6.12e-17 | 47 |
liver | 9.89e-17 | 22 |
epithelial sac | 9.89e-17 | 22 |
digestive gland | 9.89e-17 | 22 |
epithelium of foregut-midgut junction | 9.89e-17 | 22 |
anatomical boundary | 9.89e-17 | 22 |
hepatobiliary system | 9.89e-17 | 22 |
foregut-midgut junction | 9.89e-17 | 22 |
hepatic diverticulum | 9.89e-17 | 22 |
liver primordium | 9.89e-17 | 22 |
septum transversum | 9.89e-17 | 22 |
liver bud | 9.89e-17 | 22 |
endoderm-derived structure | 1.36e-15 | 118 |
endoderm | 1.36e-15 | 118 |
presumptive endoderm | 1.36e-15 | 118 |
digestive system | 1.43e-15 | 116 |
digestive tract | 1.43e-15 | 116 |
primitive gut | 1.43e-15 | 116 |
subdivision of digestive tract | 6.35e-15 | 114 |
exocrine gland | 1.61e-14 | 25 |
exocrine system | 1.61e-14 | 25 |
intestine | 7.45e-14 | 31 |
organ component layer | 1.31e-09 | 24 |
mucosa | 4.68e-08 | 15 |
gut epithelium | 6.54e-08 | 55 |
abdomen element | 9.53e-08 | 49 |
abdominal segment element | 9.53e-08 | 49 |
abdominal segment of trunk | 9.53e-08 | 49 |
abdomen | 9.53e-08 | 49 |
intestinal mucosa | 1.36e-07 | 13 |
wall of intestine | 1.36e-07 | 13 |
gastrointestinal system mucosa | 1.36e-07 | 13 |