FFCP PHASE1:Mm9::chr9:103382634..103382645,-: Difference between revisions
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{{FFCP|EntrezGene=107993|HGNC=|MCL_coexpression_id=57|UniProt=Q6NVD9|association_with_transcript=12bp_to_ENSMUST00000124310,NM_001002896,uc009rgv.1_5end|description=CAGE_peak_2_at_Bfsp2_5end|id=chr9:103382634..103382645,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,4.96e-14,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.17e-20!71;UBERON:0003075!4.17e-20!71;UBERON:0007284!4.17e-20!71;UBERON:0000970!4.47e-20!9;UBERON:0000019!4.47e-20!9;UBERON:0000047!4.47e-20!9;UBERON:0004088!4.47e-20!9;UBERON:0002104!4.47e-20!9;UBERON:0001456!4.47e-20!9;UBERON:0003072!4.47e-20!9;UBERON:0003071!4.47e-20!9;UBERON:0004128!4.47e-20!9;UBERON:0004121!2.42e-17!102;UBERON:0000924!2.42e-17!102;UBERON:0006601!2.42e-17!102;UBERON:0001444!4.84e-16!11;UBERON:0000020!1.57e-14!12;UBERON:0001032!1.57e-14!12;UBERON:0004456!1.57e-14!12;UBERON:0003056!2.47e-14!49;UBERON:0000033!8.97e-14!63;UBERON:0005085!2.99e-13!13;UBERON:0000073!8.91e-11!75;UBERON:0001016!8.91e-11!75;UBERON:0001017!3.56e-10!73;UBERON:0005743!3.56e-10!73;UBERON:0001049!1.09e-09!52;UBERON:0005068!1.09e-09!52;UBERON:0006241!1.09e-09!52;UBERON:0007135!1.09e-09!52;UBERON:0002240!1.19e-08!6;UBERON:0005174!1.19e-08!6;UBERON:0001137!1.19e-08!6;UBERON:0007811!1.77e-08!86;UBERON:0003076!8.28e-08!12;UBERON:0003057!8.28e-08!12;UBERON:0000153!2.90e-07!94;UBERON:0001948!6.15e-07!5;UBERON:0002315!6.15e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.14e-48,9;UBERON:0000019,1.14e-48,9;UBERON:0000047,1.14e-48,9;UBERON:0010312,1.14e-48,9;UBERON:0004088,1.14e-48,9;UBERON:0002104,1.14e-48,9;UBERON:0001456,1.14e-48,9;UBERON:0003072,1.14e-48,9;UBERON:0004128,1.14e-48,9;UBERON:0003071,1.14e-48,9;UBERON:0001444,9.68e-40,11;UBERON:0000020,2.17e-36,12;UBERON:0001032,2.17e-36,12;UBERON:0004456,2.17e-36,12;UBERON:0000033,1.49e-33,13;UBERON:0005085,1.49e-33,13;UBERON:0002346,7.91e-17,64;UBERON:0003075,7.91e-17,64;UBERON:0007284,7.91e-17,64;UBERON:0010371,1.30e-14,73;UBERON:0002256,4.96e-14,2;UBERON:0003056,4.50e-13,49;UBERON:0007811,1.01e-11,36;UBERON:0010314,2.39e-11,92;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000153,1.08e-09,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,2.57085885963423,1.10434270475807,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0.294628585473668,0.427115042397309,0,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0.973447578406546,0,0,0,0.841767423545896,3.513251959993,7.12696523743766,7.56260945182467,8.59017461663576,7.75616090325138,5.89323113310309,6.8402258928602,9.57202471734358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.75817529888305,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,1.35004500046361,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p2@Bfsp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107993 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NVD9 | |||
|association_with_transcript=12bp_to_ENSMUST00000124310,NM_001002896,uc009rgv.1_5end | |||
|cluster_id=chr9:103382634..103382645,- | |||
|description=CAGE_peak_2_at_Bfsp2_5end | |||
|id=chr9:103382634..103382645,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,4.96e-14,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.17e-20!71;UBERON:0003075!4.17e-20!71;UBERON:0007284!4.17e-20!71;UBERON:0000970!4.47e-20!9;UBERON:0000019!4.47e-20!9;UBERON:0000047!4.47e-20!9;UBERON:0004088!4.47e-20!9;UBERON:0002104!4.47e-20!9;UBERON:0001456!4.47e-20!9;UBERON:0003072!4.47e-20!9;UBERON:0003071!4.47e-20!9;UBERON:0004128!4.47e-20!9;UBERON:0004121!2.42e-17!102;UBERON:0000924!2.42e-17!102;UBERON:0006601!2.42e-17!102;UBERON:0001444!4.84e-16!11;UBERON:0000020!1.57e-14!12;UBERON:0001032!1.57e-14!12;UBERON:0004456!1.57e-14!12;UBERON:0003056!2.47e-14!49;UBERON:0000033!8.97e-14!63;UBERON:0005085!2.99e-13!13;UBERON:0000073!8.91e-11!75;UBERON:0001016!8.91e-11!75;UBERON:0001017!3.56e-10!73;UBERON:0005743!3.56e-10!73;UBERON:0001049!1.09e-09!52;UBERON:0005068!1.09e-09!52;UBERON:0006241!1.09e-09!52;UBERON:0007135!1.09e-09!52;UBERON:0002240!1.19e-08!6;UBERON:0005174!1.19e-08!6;UBERON:0001137!1.19e-08!6;UBERON:0007811!1.77e-08!86;UBERON:0003076!8.28e-08!12;UBERON:0003057!8.28e-08!12;UBERON:0000153!2.90e-07!94;UBERON:0001948!6.15e-07!5;UBERON:0002315!6.15e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.14e-48,9;UBERON:0000019,1.14e-48,9;UBERON:0000047,1.14e-48,9;UBERON:0010312,1.14e-48,9;UBERON:0004088,1.14e-48,9;UBERON:0002104,1.14e-48,9;UBERON:0001456,1.14e-48,9;UBERON:0003072,1.14e-48,9;UBERON:0004128,1.14e-48,9;UBERON:0003071,1.14e-48,9;UBERON:0001444,9.68e-40,11;UBERON:0000020,2.17e-36,12;UBERON:0001032,2.17e-36,12;UBERON:0004456,2.17e-36,12;UBERON:0000033,1.49e-33,13;UBERON:0005085,1.49e-33,13;UBERON:0002346,7.91e-17,64;UBERON:0003075,7.91e-17,64;UBERON:0007284,7.91e-17,64;UBERON:0010371,1.30e-14,73;UBERON:0002256,4.96e-14,2;UBERON:0003056,4.50e-13,49;UBERON:0007811,1.01e-11,36;UBERON:0010314,2.39e-11,92;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000153,1.08e-09,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,2.57085885963423,1.10434270475807,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0.294628585473668,0.427115042397309,0,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0.973447578406546,0,0,0,0.841767423545896,3.513251959993,7.12696523743766,7.56260945182467,8.59017461663576,7.75616090325138,5.89323113310309,6.8402258928602,9.57202471734358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.75817529888305,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,1.35004500046361,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p2@Bfsp2 | |||
}} |
Revision as of 11:14, 4 August 2015
Short description: | p2@Bfsp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bfsp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 12bp_to_ENSMUST00000124310, NM_001002896, uc009rgv.1_5end |
EntrezGene: | 107993 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 4.96e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
eye | 1.14e-48 | 9 |
camera-type eye | 1.14e-48 | 9 |
simple eye | 1.14e-48 | 9 |
immature eye | 1.14e-48 | 9 |
ocular region | 1.14e-48 | 9 |
visual system | 1.14e-48 | 9 |
face | 1.14e-48 | 9 |
optic cup | 1.14e-48 | 9 |
optic vesicle | 1.14e-48 | 9 |
eye primordium | 1.14e-48 | 9 |
subdivision of head | 9.68e-40 | 11 |
sense organ | 2.17e-36 | 12 |
sensory system | 2.17e-36 | 12 |
entire sense organ system | 2.17e-36 | 12 |
head | 1.49e-33 | 13 |
ectodermal placode | 1.49e-33 | 13 |
neurectoderm | 7.91e-17 | 64 |
neural plate | 7.91e-17 | 64 |
presumptive neural plate | 7.91e-17 | 64 |
ecto-epithelium | 1.30e-14 | 73 |
dorsal horn of spinal cord | 4.96e-14 | 2 |
pre-chordal neural plate | 4.50e-13 | 49 |
craniocervical region | 1.01e-11 | 36 |
structure with developmental contribution from neural crest | 2.39e-11 | 92 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
anterior region of body | 1.08e-09 | 43 |