FFCP PHASE1:Mm9::chr19:6114448..6114456,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |MCL_coexpression_id=131 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6114448..6114456,+ | |||
|description=CAGE_peak_at_chr19:6114448..6114456,+ | |description=CAGE_peak_at_chr19:6114448..6114456,+ | ||
|id=chr19:6114448..6114456,+ | |id=chr19:6114448..6114456,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.15e-21!9;CL:0002251!3.15e-21!9;CL:0000239!5.85e-17!6;CL:0000677!5.85e-17!6;CL:0000212!5.85e-17!6;CL:0000584!5.85e-17!6;CL:0000075!1.62e-14!7;CL:0002076!1.94e-12!15;CL:0000066!7.16e-12!25;CL:0000223!3.93e-09!20 | |ontology_enrichment_celltype=CL:0002563!3.15e-21!9;CL:0002251!3.15e-21!9;CL:0000239!5.85e-17!6;CL:0000677!5.85e-17!6;CL:0000212!5.85e-17!6;CL:0000584!5.85e-17!6;CL:0000075!1.62e-14!7;CL:0002076!1.94e-12!15;CL:0000066!7.16e-12!25;CL:0000223!3.93e-09!20 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.98e-38!15;UBERON:0001242!2.15e-30!13;UBERON:0000060!2.15e-30!13;UBERON:0001262!2.15e-30!13;UBERON:0004786!2.15e-30!13;UBERON:0004923!4.41e-23!24;UBERON:0000160!1.16e-21!43;UBERON:0003350!3.15e-21!9;UBERON:0004808!3.15e-21!9;UBERON:0001277!3.15e-21!9;UBERON:0000485!3.09e-17!11;UBERON:0005409!4.88e-15!59;UBERON:0000331!5.71e-14!3;UBERON:0002116!5.71e-14!3;UBERON:0001204!5.71e-14!3;UBERON:0001168!5.71e-14!3;UBERON:0001962!1.25e-09!2;UBERON:0001961!1.25e-09!2;UBERON:0001744!1.25e-09!2;UBERON:0001007!2.18e-07!128;UBERON:0001555!2.18e-07!128;UBERON:0007026!2.18e-07!128;UBERON:0004119!3.18e-07!130;UBERON:0000925!3.18e-07!130;UBERON:0006595!3.18e-07!130 | |ontology_enrichment_uberon=UBERON:0000344!3.98e-38!15;UBERON:0001242!2.15e-30!13;UBERON:0000060!2.15e-30!13;UBERON:0001262!2.15e-30!13;UBERON:0004786!2.15e-30!13;UBERON:0004923!4.41e-23!24;UBERON:0000160!1.16e-21!43;UBERON:0003350!3.15e-21!9;UBERON:0004808!3.15e-21!9;UBERON:0001277!3.15e-21!9;UBERON:0000485!3.09e-17!11;UBERON:0005409!4.88e-15!59;UBERON:0000331!5.71e-14!3;UBERON:0002116!5.71e-14!3;UBERON:0001204!5.71e-14!3;UBERON:0001168!5.71e-14!3;UBERON:0001962!1.25e-09!2;UBERON:0001961!1.25e-09!2;UBERON:0001744!1.25e-09!2;UBERON:0001007!2.18e-07!128;UBERON:0001555!2.18e-07!128;UBERON:0007026!2.18e-07!128;UBERON:0004119!3.18e-07!130;UBERON:0000925!3.18e-07!130;UBERON:0006595!3.18e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,2.33e-44,3;UBERON:0002116,2.33e-44,3;UBERON:0001204,2.33e-44,3;UBERON:0001168,2.33e-44,3;UBERON:0002108,1.58e-33,4;UBERON:0001962,2.55e-29,2;UBERON:0001961,2.55e-29,2;UBERON:0001744,2.55e-29,2;UBERON:0000344,1.59e-24,15;UBERON:0002465,6.06e-20,3;UBERON:0003199,1.33e-15,1;UBERON:0004923,1.52e-15,24;UBERON:0001242,6.65e-11,13;UBERON:0001262,6.65e-11,13;UBERON:0004786,6.65e-11,13;UBERON:0007023,1.55e-07,51 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,2.29692785646008,0,0.215471232685889,9.5011709728187,1.76421090831952,2.21730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.648414149624083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,2.29692785646008,0,0.215471232685889,9.5011709728187,1.76421090831952,2.21730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.648414149624083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:6114448..6114456,+ | |short_description=p@chr19:6114448..6114456,+ | ||
}} | }} |
Latest revision as of 11:59, 4 August 2015
Short description: | p@chr19:6114448..6114456, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6114448..6114456, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 2.33e-44 | 3 |
ileum | 2.33e-44 | 3 |
mucosa of small intestine | 2.33e-44 | 3 |
wall of small intestine | 2.33e-44 | 3 |
small intestine | 1.58e-33 | 4 |
gut-associated lymphoid tissue | 2.55e-29 | 2 |
mucosa-associated lymphoid tissue | 2.55e-29 | 2 |
lymphoid tissue | 2.55e-29 | 2 |
mucosa | 1.59e-24 | 15 |
lymphoid system | 6.06e-20 | 3 |
egg chamber | 1.33e-15 | 1 |
organ component layer | 1.52e-15 | 24 |
intestinal mucosa | 6.65e-11 | 13 |
wall of intestine | 6.65e-11 | 13 |
gastrointestinal system mucosa | 6.65e-11 | 13 |
adult organism | 1.55e-07 | 51 |