FFCP PHASE1:Mm9::chr9:108891882..108891894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108891882..108891894,+ | |||
|description=CAGE_peak_at_chr9:108891882..108891894,+ | |description=CAGE_peak_at_chr9:108891882..108891894,+ | ||
|id=chr9:108891882..108891894,+ | |id=chr9:108891882..108891894,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.18e-14,6;CL:0000677,1.18e-14,6;CL:0000584,1.18e-14,6;CL:0000075,1.36e-12,7;CL:0002563,7.81e-10,9;CL:0002251,7.81e-10,9;CL:0000682,1.63e-07,3;CL:0000066,3.66e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.02e-20!43;UBERON:0005409!2.06e-18!59;UBERON:0000344!5.58e-14!15;UBERON:0001242!3.47e-11!13;UBERON:0000060!3.47e-11!13;UBERON:0001262!3.47e-11!13;UBERON:0004786!3.47e-11!13;UBERON:0004923!9.88e-08!24;UBERON:0001007!3.59e-07!128;UBERON:0001555!3.59e-07!128;UBERON:0007026!3.59e-07!128;UBERON:0004119!6.08e-07!130;UBERON:0000925!6.08e-07!130;UBERON:0006595!6.08e-07!130 | |ontology_enrichment_uberon=UBERON:0000160!3.02e-20!43;UBERON:0005409!2.06e-18!59;UBERON:0000344!5.58e-14!15;UBERON:0001242!3.47e-11!13;UBERON:0000060!3.47e-11!13;UBERON:0001262!3.47e-11!13;UBERON:0004786!3.47e-11!13;UBERON:0004923!9.88e-08!24;UBERON:0001007!3.59e-07!128;UBERON:0001555!3.59e-07!128;UBERON:0007026!3.59e-07!128;UBERON:0004119!6.08e-07!130;UBERON:0000925!6.08e-07!130;UBERON:0006595!6.08e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.10e-31,31;UBERON:0005409,2.79e-20,47;UBERON:0001242,1.47e-19,13;UBERON:0001262,1.47e-19,13;UBERON:0004786,1.47e-19,13;UBERON:0000344,7.19e-17,15;UBERON:0002108,4.73e-12,4;UBERON:0004923,2.71e-10,24;UBERON:0003350,7.81e-10,9;UBERON:0004808,7.81e-10,9;UBERON:0001277,7.81e-10,9;UBERON:0000485,4.51e-08,11;UBERON:0000331,8.07e-08,3;UBERON:0002116,8.07e-08,3;UBERON:0001204,8.07e-08,3;UBERON:0001168,8.07e-08,3;UBERON:0004921,3.52e-07,114;UBERON:0001007,5.09e-07,116;UBERON:0001555,5.09e-07,116;UBERON:0007026,5.09e-07,116;UBERON:0004119,7.28e-07,118;UBERON:0000925,7.28e-07,118;UBERON:0006595,7.28e-07,118 | |||
|phase1_expression=0,6.97950815278722,2.27499619694768,3.62957053568196,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.22940928106717,1.14846392823004,1.29228598847722,0.646413698057667,1.52018735565099,0.756090389279792,1.55211357458713,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.90895623329899,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.951128130562796,1.42358718463353,0.823494773620054,0,0.198956472041151,0.19496408711912,3.59527763461689,2.37751854862164,1.99141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.97950815278722,2.27499619694768,3.62957053568196,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.22940928106717,1.14846392823004,1.29228598847722,0.646413698057667,1.52018735565099,0.756090389279792,1.55211357458713,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.90895623329899,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.951128130562796,1.42358718463353,0.823494773620054,0,0.198956472041151,0.19496408711912,3.59527763461689,2.37751854862164,1.99141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0.566153061577665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:108891882..108891894,+ | |short_description=p@chr9:108891882..108891894,+ | ||
}} | }} |
Latest revision as of 14:10, 4 August 2015
Short description: | p@chr9:108891882..108891894, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108891882..108891894, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.18e-14 | 6 |
gut absorptive cell | 1.18e-14 | 6 |
enterocyte | 1.18e-14 | 6 |
columnar/cuboidal epithelial cell | 1.36e-12 | 7 |
intestinal epithelial cell | 7.81e-10 | 9 |
epithelial cell of alimentary canal | 7.81e-10 | 9 |
M cell of gut | 1.63e-07 | 3 |
epithelial cell | 3.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.10e-31 | 31 |
gastrointestinal system | 2.79e-20 | 47 |
intestinal mucosa | 1.47e-19 | 13 |
wall of intestine | 1.47e-19 | 13 |
gastrointestinal system mucosa | 1.47e-19 | 13 |
mucosa | 7.19e-17 | 15 |
small intestine | 4.73e-12 | 4 |
organ component layer | 2.71e-10 | 24 |
epithelium of mucosa | 7.81e-10 | 9 |
gastrointestinal system epithelium | 7.81e-10 | 9 |
intestinal epithelium | 7.81e-10 | 9 |
simple columnar epithelium | 4.51e-08 | 11 |
ileal mucosa | 8.07e-08 | 3 |
ileum | 8.07e-08 | 3 |
mucosa of small intestine | 8.07e-08 | 3 |
wall of small intestine | 8.07e-08 | 3 |
subdivision of digestive tract | 3.52e-07 | 114 |
digestive system | 5.09e-07 | 116 |
digestive tract | 5.09e-07 | 116 |
primitive gut | 5.09e-07 | 116 |
endoderm-derived structure | 7.28e-07 | 118 |
endoderm | 7.28e-07 | 118 |
presumptive endoderm | 7.28e-07 | 118 |