FFCP PHASE1:Mm9::chr2:168548047..168548049,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:168548047..168548049,- | |||
|description=CAGE_peak_at_chr2:168548047..168548049,- | |description=CAGE_peak_at_chr2:168548047..168548049,- | ||
|id=chr2:168548047..168548049,- | |id=chr2:168548047..168548049,- | ||
|ontology_enrichment_celltype=CL:0000239!9.01e-25!6;CL:0000677!9.01e-25!6;CL:0000212!9.01e-25!6;CL:0000584!9.01e-25!6;CL:0000075!3.67e-21!7;CL:0002563!2.42e-16!9;CL:0002251!2.42e-16!9;CL:0000473!3.78e-13!3;CL:0000627!3.78e-13!3;CL:0000682!3.78e-13!3;CL:0000066!3.39e-12!25;CL:0002076!1.42e-09!15;CL:0000223!4.97e-07!20 | |ontology_enrichment_celltype=CL:0000239!9.01e-25!6;CL:0000677!9.01e-25!6;CL:0000212!9.01e-25!6;CL:0000584!9.01e-25!6;CL:0000075!3.67e-21!7;CL:0002563!2.42e-16!9;CL:0002251!2.42e-16!9;CL:0000473!3.78e-13!3;CL:0000627!3.78e-13!3;CL:0000682!3.78e-13!3;CL:0000066!3.39e-12!25;CL:0002076!1.42e-09!15;CL:0000223!4.97e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.47e-38,6;CL:0000677,1.47e-38,6;CL:0000584,1.47e-38,6;CL:0000075,4.92e-33,7;CL:0002563,1.16e-25,9;CL:0002251,1.16e-25,9;CL:0000066,4.39e-20,25;CL:0000682,5.37e-20,3;CL:0002076,2.64e-15,15;CL:0000223,2.10e-11,20;CL:0000473,6.66e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.55e-36!15;UBERON:0001242!1.75e-29!13;UBERON:0000060!1.75e-29!13;UBERON:0001262!1.75e-29!13;UBERON:0004786!1.75e-29!13;UBERON:0004923!4.64e-22!24;UBERON:0000160!1.68e-20!43;UBERON:0003350!2.42e-16!9;UBERON:0004808!2.42e-16!9;UBERON:0001277!2.42e-16!9;UBERON:0005409!3.65e-14!59;UBERON:0000485!2.86e-13!11;UBERON:0000331!3.60e-12!3;UBERON:0002116!3.60e-12!3;UBERON:0001204!3.60e-12!3;UBERON:0001168!3.60e-12!3;UBERON:0001962!7.88e-09!2;UBERON:0001961!7.88e-09!2;UBERON:0001744!7.88e-09!2;UBERON:0001007!9.46e-07!128;UBERON:0001555!9.46e-07!128;UBERON:0007026!9.46e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!1.55e-36!15;UBERON:0001242!1.75e-29!13;UBERON:0000060!1.75e-29!13;UBERON:0001262!1.75e-29!13;UBERON:0004786!1.75e-29!13;UBERON:0004923!4.64e-22!24;UBERON:0000160!1.68e-20!43;UBERON:0003350!2.42e-16!9;UBERON:0004808!2.42e-16!9;UBERON:0001277!2.42e-16!9;UBERON:0005409!3.65e-14!59;UBERON:0000485!2.86e-13!11;UBERON:0000331!3.60e-12!3;UBERON:0002116!3.60e-12!3;UBERON:0001204!3.60e-12!3;UBERON:0001168!3.60e-12!3;UBERON:0001962!7.88e-09!2;UBERON:0001961!7.88e-09!2;UBERON:0001744!7.88e-09!2;UBERON:0001007!9.46e-07!128;UBERON:0001555!9.46e-07!128;UBERON:0007026!9.46e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.91e-41,15;UBERON:0001242,1.56e-30,13;UBERON:0001262,1.56e-30,13;UBERON:0004786,1.56e-30,13;UBERON:0003350,1.16e-25,9;UBERON:0004808,1.16e-25,9;UBERON:0001277,1.16e-25,9;UBERON:0004923,3.51e-25,24;UBERON:0000485,5.85e-21,11;UBERON:0000160,1.21e-15,31;UBERON:0001962,4.00e-13,2;UBERON:0001961,4.00e-13,2;UBERON:0001744,4.00e-13,2;UBERON:0005409,5.34e-10,47;UBERON:0002465,4.66e-09,3;UBERON:0000331,6.18e-09,3;UBERON:0002116,6.18e-09,3;UBERON:0001204,6.18e-09,3;UBERON:0001168,6.18e-09,3;UBERON:0003199,1.78e-07,1;UBERON:0002108,6.45e-07,4 | |||
|phase1_expression=0,10.4692622291808,13.1949779422965,4.83942738090928,2.50447864973174,2.35030980676646,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,2.2940928106717,6.31655160526522,4.73838195774982,2.37018355954478,0.950117097281869,1.00812051903972,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.11560453330835,0,0,0,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,10.4692622291808,13.1949779422965,4.83942738090928,2.50447864973174,2.35030980676646,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,2.2940928106717,6.31655160526522,4.73838195774982,2.37018355954478,0.950117097281869,1.00812051903972,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.11560453330835,0,0,0,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:168548047..168548049,- | |short_description=p@chr2:168548047..168548049,- | ||
}} | }} |
Latest revision as of 14:56, 4 August 2015
Short description: | p@chr2:168548047..168548049, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:168548047..168548049, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.47e-38 | 6 |
gut absorptive cell | 1.47e-38 | 6 |
enterocyte | 1.47e-38 | 6 |
columnar/cuboidal epithelial cell | 4.92e-33 | 7 |
intestinal epithelial cell | 1.16e-25 | 9 |
epithelial cell of alimentary canal | 1.16e-25 | 9 |
epithelial cell | 4.39e-20 | 25 |
M cell of gut | 5.37e-20 | 3 |
endo-epithelial cell | 2.64e-15 | 15 |
endodermal cell | 2.10e-11 | 20 |
defensive cell | 6.66e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.91e-41 | 15 |
intestinal mucosa | 1.56e-30 | 13 |
wall of intestine | 1.56e-30 | 13 |
gastrointestinal system mucosa | 1.56e-30 | 13 |
epithelium of mucosa | 1.16e-25 | 9 |
gastrointestinal system epithelium | 1.16e-25 | 9 |
intestinal epithelium | 1.16e-25 | 9 |
organ component layer | 3.51e-25 | 24 |
simple columnar epithelium | 5.85e-21 | 11 |
intestine | 1.21e-15 | 31 |
gut-associated lymphoid tissue | 4.00e-13 | 2 |
mucosa-associated lymphoid tissue | 4.00e-13 | 2 |
lymphoid tissue | 4.00e-13 | 2 |
gastrointestinal system | 5.34e-10 | 47 |
lymphoid system | 4.66e-09 | 3 |
ileal mucosa | 6.18e-09 | 3 |
ileum | 6.18e-09 | 3 |
mucosa of small intestine | 6.18e-09 | 3 |
wall of small intestine | 6.18e-09 | 3 |
egg chamber | 1.78e-07 | 1 |
small intestine | 6.45e-07 | 4 |