FFCP PHASE1:Mm9::chr14:66592214..66592233,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=290 | |MCL_coexpression_id=290 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:66592214..66592233,+ | |||
|description=CAGE_peak_at_chr14:66592214..66592233,+ | |description=CAGE_peak_at_chr14:66592214..66592233,+ | ||
|id=chr14:66592214..66592233,+ | |id=chr14:66592214..66592233,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.71e-11,5;CL:0000068,8.96e-08,3;CL:0002202,8.96e-08,3;CL:0000069,8.96e-08,3;CL:0002632,8.96e-08,3;CL:0002368,8.96e-08,3;CL:0000307,8.96e-08,3;CL:0000377,8.96e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!2.00e-12!269;UBERON:0000466!6.86e-12!79;UBERON:0003886!2.06e-09!38;UBERON:0002553!7.07e-09!39;UBERON:0002323!9.24e-09!37;UBERON:0004458!9.24e-09!37;UBERON:0000464!5.05e-08!57;UBERON:0002021!2.54e-07!10;UBERON:0000411!2.54e-07!10;UBERON:0001950!2.54e-07!10;UBERON:0001264!2.73e-07!12;UBERON:0003922!2.73e-07!12;UBERON:0002114!2.73e-07!12;UBERON:0003923!2.73e-07!12;UBERON:0003924!2.73e-07!12;UBERON:0003921!2.73e-07!12;UBERON:0005177!5.11e-07!85 | |ontology_enrichment_uberon=UBERON:0000062!2.00e-12!269;UBERON:0000466!6.86e-12!79;UBERON:0003886!2.06e-09!38;UBERON:0002553!7.07e-09!39;UBERON:0002323!9.24e-09!37;UBERON:0004458!9.24e-09!37;UBERON:0000464!5.05e-08!57;UBERON:0002021!2.54e-07!10;UBERON:0000411!2.54e-07!10;UBERON:0001950!2.54e-07!10;UBERON:0001264!2.73e-07!12;UBERON:0003922!2.73e-07!12;UBERON:0002114!2.73e-07!12;UBERON:0003923!2.73e-07!12;UBERON:0003924!2.73e-07!12;UBERON:0003921!2.73e-07!12;UBERON:0005177!5.11e-07!85 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.26e-11,10;UBERON:0000411,4.26e-11,10;UBERON:0001950,4.26e-11,10;UBERON:0002619,3.00e-09,17;UBERON:0003126,8.96e-08,3;UBERON:0001005,8.96e-08,3;UBERON:0007196,8.96e-08,3;UBERON:0001558,8.96e-08,3;UBERON:0000956,4.19e-07,21;UBERON:0001869,4.19e-07,21;UBERON:0000203,4.19e-07,21 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,1.91990907352088,1.37645568640302,0.57423196411502,0.430761996159075,1.07735616342945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,0.872100625521786,1.31811709640683,1.55543919259427,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,1.19840044207362,3.84218305321555,0,0,0,0.285650984403804,1.54607978666129,0,0,0,5.50579404996943,1.40456071893706,1.38245879930619,0,0,0,0.558365998002762,0.56276261003168,2.29197371665215,0.294628585473668,0.284743361598206,0,0,0,6.95674772884027,0.860423876981386,7.47968467078526,2.15881276655127,4.54843492213368,2.24013443548668,0.702222100658759,0,0,0,5.49289337129054,0,0,0,9.74209684550464,10.1343946190039,10.6160133453104,1.1418387971906,0,0.445326417194474,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.62336413367868,0.324482526135515,0.101839363850316,1.8661045591514,9.35074206204597,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.402619256281115,0.630869845692382,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,2.07516838961004,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,7.18841032636773,0.372140947668503,1.24815069245824,1.01031551178845,0.358794827043824,0.964887042726734,0.369506380333209,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,1.18120757152309,0.614870295887855,0.516856586336442,1.09060118843252,1.42598951353889,0.632073515871632,3.16255825724996,2.06271086496374,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0.457556346413045,0,0,0,2.86401185404534,0.158167996790568,0,0.216010681643603,0.418176592028937,0.87345025498471,0,0.330613822901344,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,1.05621514781179,0.651021924219751,1.04859344425711,2.41584120826006,1.44015003128933,0.316011120628178,0.405450430580328,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0,1.12950368523413,2.30162618253588,2.29158205375759,0.68741272937475,1.37016503954128,1.5107877947794,2.02506750069542,2.2516060161211,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0.640595388419176,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,1.91990907352088,1.37645568640302,0.57423196411502,0.430761996159075,1.07735616342945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,1.56478268869608,0.872100625521786,1.31811709640683,1.55543919259427,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,1.19840044207362,3.84218305321555,0,0,0,0.285650984403804,1.54607978666129,0,0,0,5.50579404996943,1.40456071893706,1.38245879930619,0,0,0,0.558365998002762,0.56276261003168,2.29197371665215,0.294628585473668,0.284743361598206,0,0,0,6.95674772884027,0.860423876981386,7.47968467078526,2.15881276655127,4.54843492213368,2.24013443548668,0.702222100658759,0,0,0,5.49289337129054,0,0,0,9.74209684550464,10.1343946190039,10.6160133453104,1.1418387971906,0,0.445326417194474,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.62336413367868,0.324482526135515,0.101839363850316,1.8661045591514,9.35074206204597,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.402619256281115,0.630869845692382,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,2.07516838961004,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,7.18841032636773,0.372140947668503,1.24815069245824,1.01031551178845,0.358794827043824,0.964887042726734,0.369506380333209,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,1.18120757152309,0.614870295887855,0.516856586336442,1.09060118843252,1.42598951353889,0.632073515871632,3.16255825724996,2.06271086496374,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0.457556346413045,0,0,0,2.86401185404534,0.158167996790568,0,0.216010681643603,0.418176592028937,0.87345025498471,0,0.330613822901344,0.785267825952089,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,1.05621514781179,0.651021924219751,1.04859344425711,2.41584120826006,1.44015003128933,0.316011120628178,0.405450430580328,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0,1.12950368523413,2.30162618253588,2.29158205375759,0.68741272937475,1.37016503954128,1.5107877947794,2.02506750069542,2.2516060161211,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr14:66592214..66592233,+ | |short_description=p@chr14:66592214..66592233,+ | ||
}} | }} |
Latest revision as of 16:17, 4 August 2015
Short description: | p@chr14:66592214..66592233, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66592214..66592233, + |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.71e-11 | 5 |
duct epithelial cell | 8.96e-08 | 3 |
epithelial cell of tracheobronchial tree | 8.96e-08 | 3 |
branched duct epithelial cell | 8.96e-08 | 3 |
epithelial cell of lower respiratory tract | 8.96e-08 | 3 |
respiratory epithelial cell | 8.96e-08 | 3 |
tracheal epithelial cell | 8.96e-08 | 3 |
tracheoblast | 8.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.26e-11 | 10 |
visual cortex | 4.26e-11 | 10 |
neocortex | 4.26e-11 | 10 |
regional part of cerebral cortex | 3.00e-09 | 17 |
trachea | 8.96e-08 | 3 |
respiratory airway | 8.96e-08 | 3 |
tracheobronchial tree | 8.96e-08 | 3 |
lower respiratory tract | 8.96e-08 | 3 |
cerebral cortex | 4.19e-07 | 21 |
cerebral hemisphere | 4.19e-07 | 21 |
pallium | 4.19e-07 | 21 |