FFCP PHASE1:Mm9::chr5:91068698..91068709,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:91068698..91068709,- | |||
|description=CAGE_peak_at_chr5:91068698..91068709,- | |description=CAGE_peak_at_chr5:91068698..91068709,- | ||
|id=chr5:91068698..91068709,- | |id=chr5:91068698..91068709,- | ||
|ontology_enrichment_celltype=CL:0000239!2.54e-14!6;CL:0000677!2.54e-14!6;CL:0000212!2.54e-14!6;CL:0000584!2.54e-14!6;CL:0000075!3.75e-12!7;CL:0002563!2.92e-09!9;CL:0002251!2.92e-09!9;CL:0000473!2.39e-08!3;CL:0000627!2.39e-08!3;CL:0000682!2.39e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.78e-21,3;CL:0000239,4.63e-19,6;CL:0000677,4.63e-19,6;CL:0000584,4.63e-19,6;CL:0000075,2.19e-16,7;CL:0000066,2.96e-13,25;CL:0002563,8.24e-13,9;CL:0002251,8.24e-13,9;CL:0000473,1.49e-09,7;CL:0002076,8.94e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.00e-20!15;UBERON:0004923!6.03e-19!24;UBERON:0001242!1.36e-16!13;UBERON:0000060!1.36e-16!13;UBERON:0001262!1.36e-16!13;UBERON:0004786!1.36e-16!13;UBERON:0000160!6.78e-15!43;UBERON:0005409!6.88e-11!59;UBERON:0003350!2.92e-09!9;UBERON:0004808!2.92e-09!9;UBERON:0001277!2.92e-09!9;UBERON:0004119!1.17e-08!130;UBERON:0000925!1.17e-08!130;UBERON:0006595!1.17e-08!130;UBERON:0000331!1.16e-07!3;UBERON:0002116!1.16e-07!3;UBERON:0001204!1.16e-07!3;UBERON:0001168!1.16e-07!3;UBERON:0000485!2.02e-07!11;UBERON:0005631!2.13e-07!3;UBERON:0000478!2.13e-07!3;UBERON:0000158!2.13e-07!3;UBERON:0001007!3.12e-07!128;UBERON:0001555!3.12e-07!128;UBERON:0007026!3.12e-07!128;UBERON:0000064!3.18e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.54e-28,15;UBERON:0004923,5.31e-22,24;UBERON:0001242,1.06e-18,13;UBERON:0001262,1.06e-18,13;UBERON:0004786,1.06e-18,13;UBERON:0001962,2.29e-14,2;UBERON:0001961,2.29e-14,2;UBERON:0001744,2.29e-14,2;UBERON:0003350,8.24e-13,9;UBERON:0004808,8.24e-13,9;UBERON:0001277,8.24e-13,9;UBERON:0000485,1.58e-10,11;UBERON:0000160,2.72e-10,31;UBERON:0002465,6.83e-10,3;UBERON:0000331,1.40e-09,3;UBERON:0002116,1.40e-09,3;UBERON:0001204,1.40e-09,3;UBERON:0001168,1.40e-09,3;UBERON:0003199,4.80e-08,1;UBERON:0002108,2.09e-07,4 | |||
|phase1_expression=0,4.88565570695105,4.09499315450582,0.30246421130683,0.500895729946347,2.68606835059024,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,3.44539178469012,2.58457197695445,4.74036711908956,0.570070258369122,1.00812051903972,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.85115396664481,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,4.88565570695105,4.09499315450582,0.30246421130683,0.500895729946347,2.68606835059024,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,3.44539178469012,2.58457197695445,4.74036711908956,0.570070258369122,1.00812051903972,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.85115396664481,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0.16488625294148,0,0.180938774784468,0.119372344003136,0.328281799490123,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr5:91068698..91068709,- | |short_description=p@chr5:91068698..91068709,- | ||
}} | }} |
Latest revision as of 18:31, 4 August 2015
Short description: | p@chr5:91068698..91068709, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:91068698..91068709, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.78e-21 | 3 |
brush border epithelial cell | 4.63e-19 | 6 |
gut absorptive cell | 4.63e-19 | 6 |
enterocyte | 4.63e-19 | 6 |
columnar/cuboidal epithelial cell | 2.19e-16 | 7 |
epithelial cell | 2.96e-13 | 25 |
intestinal epithelial cell | 8.24e-13 | 9 |
epithelial cell of alimentary canal | 8.24e-13 | 9 |
defensive cell | 1.49e-09 | 7 |
endo-epithelial cell | 8.94e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.54e-28 | 15 |
organ component layer | 5.31e-22 | 24 |
intestinal mucosa | 1.06e-18 | 13 |
wall of intestine | 1.06e-18 | 13 |
gastrointestinal system mucosa | 1.06e-18 | 13 |
gut-associated lymphoid tissue | 2.29e-14 | 2 |
mucosa-associated lymphoid tissue | 2.29e-14 | 2 |
lymphoid tissue | 2.29e-14 | 2 |
epithelium of mucosa | 8.24e-13 | 9 |
gastrointestinal system epithelium | 8.24e-13 | 9 |
intestinal epithelium | 8.24e-13 | 9 |
simple columnar epithelium | 1.58e-10 | 11 |
intestine | 2.72e-10 | 31 |
lymphoid system | 6.83e-10 | 3 |
ileal mucosa | 1.40e-09 | 3 |
ileum | 1.40e-09 | 3 |
mucosa of small intestine | 1.40e-09 | 3 |
wall of small intestine | 1.40e-09 | 3 |
egg chamber | 4.80e-08 | 1 |
small intestine | 2.09e-07 | 4 |