FFCP PHASE1:Mm9::chr1:135811991..135811998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1422 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135811991..135811998,- | |||
|description=CAGE_peak_at_chr1:135811991..135811998,- | |description=CAGE_peak_at_chr1:135811991..135811998,- | ||
|id=chr1:135811991..135811998,- | |id=chr1:135811991..135811998,- | ||
|ontology_enrichment_celltype=CL:0002453!1.97e-10!8;CL:0000680!5.18e-10!6;CL:0000183!5.18e-10!6;CL:0000187!5.18e-10!6;CL:0000056!5.18e-10!6;CL:0000222!1.62e-08!7;CL:0000333!3.49e-08!10;CL:0000095!3.49e-08!10;CL:0000243!3.49e-08!10;CL:0000123!3.49e-08!10;CL:0000125!3.49e-08!10;CL:0000030!3.49e-08!10;CL:0000339!3.49e-08!10;CL:0000192!5.63e-08!3;CL:0000359!5.63e-08!3;CL:0002539!5.63e-08!3;CL:0000514!5.63e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.23e-36,2;CL:0002604,4.23e-36,2;CL:0002293,5.11e-24,3;CL:0000128,8.26e-13,6;CL:0000126,8.26e-13,6;CL:0000127,8.26e-13,6;CL:0002453,7.26e-10,8;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10;CL:0002494,5.46e-07,3;CL:0000737,5.46e-07,3;CL:0000746,5.46e-07,3;CL:0000513,5.46e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!3.83e-10!4;UBERON:0001637!3.83e-10!4;UBERON:0003509!3.83e-10!4;UBERON:0004573!3.83e-10!4;UBERON:0004571!3.83e-10!4;UBERON:0010191!3.83e-10!4;UBERON:0004572!3.83e-10!4;UBERON:0000055!4.26e-08!5;UBERON:0001981!4.26e-08!5;UBERON:0002049!4.26e-08!5;UBERON:0007500!4.26e-08!5;UBERON:0007798!4.26e-08!5;UBERON:0004537!4.26e-08!5;UBERON:0006965!4.26e-08!5;UBERON:0001135!5.63e-08!3;UBERON:0004237!5.63e-08!3;UBERON:0004695!5.63e-08!3;UBERON:0002111!5.63e-08!3;UBERON:0004178!5.63e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,3.95e-11,7;UBERON:0003022,3.95e-11,7;UBERON:0002421,3.95e-11,7;UBERON:0000349,3.95e-11,7;UBERON:0002600,3.95e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.405507724878058,0.367093504323363,0,0.218025156380447,2.63623419281366,4.47188767870852,0.279972843250725,0,0,0,0,0.257259436035947,1.14613375975503,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.405507724878058,0.367093504323363,0,0.218025156380447,2.63623419281366,4.47188767870852,0.279972843250725,0,0,0,0,0.257259436035947,1.14613375975503,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p@chr1:135811991..135811998,- | |short_description=p@chr1:135811991..135811998,- | ||
}} | }} |
Latest revision as of 19:49, 4 August 2015
Short description: | p@chr1:135811991..135811998, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811991..135811998, - |
Coexpression cluster: | MCL_coexpression_mm9:1422 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.23e-36 | 2 |
astrocyte of the hippocampus | 4.23e-36 | 2 |
epithelial cell of thymus | 5.11e-24 | 3 |
oligodendrocyte | 8.26e-13 | 6 |
macroglial cell | 8.26e-13 | 6 |
astrocyte | 8.26e-13 | 6 |
oligodendrocyte precursor cell | 7.26e-10 | 8 |
migratory neural crest cell | 4.34e-08 | 10 |
neuron associated cell | 4.34e-08 | 10 |
glial cell (sensu Vertebrata) | 4.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.34e-08 | 10 |
glial cell | 4.34e-08 | 10 |
glioblast | 4.34e-08 | 10 |
glioblast (sensu Vertebrata) | 4.34e-08 | 10 |
cardiocyte | 5.46e-07 | 3 |
striated muscle cell | 5.46e-07 | 3 |
cardiac muscle cell | 5.46e-07 | 3 |
cardiac muscle myoblast | 5.46e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.95e-11 | 7 |
lobe parts of cerebral cortex | 3.95e-11 | 7 |
hippocampal formation | 3.95e-11 | 7 |
limbic system | 3.95e-11 | 7 |
limbic lobe | 3.95e-11 | 7 |