FFCP PHASE1:Mm9::chr9:14556402..14556417,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3305 | |MCL_coexpression_id=3305 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:14556402..14556417,- | |||
|description=CAGE_peak_at_chr9:14556402..14556417,- | |description=CAGE_peak_at_chr9:14556402..14556417,- | ||
|id=chr9:14556402..14556417,- | |id=chr9:14556402..14556417,- | ||
|ontology_enrichment_celltype=CL:0002563!4.06e-09!9;CL:0002251!4.06e-09!9;CL:0000239!2.58e-07!6;CL:0000677!2.58e-07!6;CL:0000212!2.58e-07!6;CL:0000584!2.58e-07!6 | |ontology_enrichment_celltype=CL:0002563!4.06e-09!9;CL:0002251!4.06e-09!9;CL:0000239!2.58e-07!6;CL:0000677!2.58e-07!6;CL:0000212!2.58e-07!6;CL:0000584!2.58e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.51e-14,6;CL:0000677,1.51e-14,6;CL:0000584,1.51e-14,6;CL:0000075,2.39e-12,7;CL:0002563,3.23e-12,9;CL:0002251,3.23e-12,9;CL:0000682,8.58e-08,3;CL:0000066,1.25e-07,25;CL:0002076,7.08e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.84e-19!59;UBERON:0000160!1.74e-16!43;UBERON:0000344!1.51e-14!15;UBERON:0001242!1.02e-12!13;UBERON:0000060!1.02e-12!13;UBERON:0001262!1.02e-12!13;UBERON:0004786!1.02e-12!13;UBERON:0004119!1.17e-12!130;UBERON:0000925!1.17e-12!130;UBERON:0006595!1.17e-12!130;UBERON:0004923!8.13e-12!24;UBERON:0001007!8.85e-12!128;UBERON:0001555!8.85e-12!128;UBERON:0007026!8.85e-12!128;UBERON:0004921!1.26e-10!126;UBERON:0004185!1.26e-10!126;UBERON:0003350!4.06e-09!9;UBERON:0004808!4.06e-09!9;UBERON:0001277!4.06e-09!9;UBERON:0005153!5.48e-07!17;UBERON:0000485!6.44e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!1.84e-19!59;UBERON:0000160!1.74e-16!43;UBERON:0000344!1.51e-14!15;UBERON:0001242!1.02e-12!13;UBERON:0000060!1.02e-12!13;UBERON:0001262!1.02e-12!13;UBERON:0004786!1.02e-12!13;UBERON:0004119!1.17e-12!130;UBERON:0000925!1.17e-12!130;UBERON:0006595!1.17e-12!130;UBERON:0004923!8.13e-12!24;UBERON:0001007!8.85e-12!128;UBERON:0001555!8.85e-12!128;UBERON:0007026!8.85e-12!128;UBERON:0004921!1.26e-10!126;UBERON:0004185!1.26e-10!126;UBERON:0003350!4.06e-09!9;UBERON:0004808!4.06e-09!9;UBERON:0001277!4.06e-09!9;UBERON:0005153!5.48e-07!17;UBERON:0000485!6.44e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.91e-28,31;UBERON:0005409,4.51e-27,47;UBERON:0000344,4.71e-24,15;UBERON:0001242,5.04e-20,13;UBERON:0001262,5.04e-20,13;UBERON:0004786,5.04e-20,13;UBERON:0004923,2.37e-16,24;UBERON:0003350,3.23e-12,9;UBERON:0004808,3.23e-12,9;UBERON:0001277,3.23e-12,9;UBERON:0001007,6.95e-11,116;UBERON:0001555,6.95e-11,116;UBERON:0007026,6.95e-11,116;UBERON:0004119,1.39e-10,118;UBERON:0000925,1.39e-10,118;UBERON:0006595,1.39e-10,118;UBERON:0000485,8.70e-10,11;UBERON:0004921,3.57e-09,114;UBERON:0002108,4.95e-09,4;UBERON:0000331,2.52e-07,3;UBERON:0002116,2.52e-07,3;UBERON:0001204,2.52e-07,3;UBERON:0001168,2.52e-07,3;UBERON:0007023,6.93e-07,51 | |||
|phase1_expression=0,2.79180326111489,15.4699741392442,21.7774232140918,30.0537437967808,5.87577451691614,6.07392865548367,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,3.83981814704176,6.42345986988076,5.16808767703518,13.3536218809313,4.74036711908956,2.66032787238923,3.78045194639896,7.53883736228036,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0.125666591329675,10.6293836125781,0,0,0.161766849947409,0,0,18.6391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,5.05445516867349,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,13.5471701023357,3.43785736662608,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.570676878337677,4.74529061544512,0.988193728344065,1.00534083520108,0.795825888164603,1.55971269695296,6.29173586057955,4.10662294761919,10.9527700289902,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0.502518772325447,1.42826184531608,1.75620283072019,0.315270288212382,0.221464689648775,0.318909537314974,0.491589944147214,0.518054945597687,0.433947175744535,0,0,11.3105782794378,3.03530420935206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0.241251699712623,1.07435109602823,0.164140899745061,2.33184669303881,0,0,0,0,0,0,0.228778173206523,0,0,0,5.72802370809068,0.158167996790568,0,0.972048067396211,0.418176592028937,1.74690050996942,1.75323650300267,0.826534557253359,5.49687478166462,4.92536898508813,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,3.37828455812128,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0,0.760437899670719,0,0,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0,0.695603506861264 | |phase1_expression=0,2.79180326111489,15.4699741392442,21.7774232140918,30.0537437967808,5.87577451691614,6.07392865548367,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,3.83981814704176,6.42345986988076,5.16808767703518,13.3536218809313,4.74036711908956,2.66032787238923,3.78045194639896,7.53883736228036,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0.125666591329675,10.6293836125781,0,0,0.161766849947409,0,0,18.6391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,5.05445516867349,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,13.5471701023357,3.43785736662608,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.570676878337677,4.74529061544512,0.988193728344065,1.00534083520108,0.795825888164603,1.55971269695296,6.29173586057955,4.10662294761919,10.9527700289902,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0.502518772325447,1.42826184531608,1.75620283072019,0.315270288212382,0.221464689648775,0.318909537314974,0.491589944147214,0.518054945597687,0.433947175744535,0,0,11.3105782794378,3.03530420935206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0.241251699712623,1.07435109602823,0.164140899745061,2.33184669303881,0,0,0,0,0,0,0.228778173206523,0,0,0,5.72802370809068,0.158167996790568,0,0.972048067396211,0.418176592028937,1.74690050996942,1.75323650300267,0.826534557253359,5.49687478166462,4.92536898508813,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,3.37828455812128,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0,0.760437899670719,0,0,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0,0.695603506861264 | ||
|short_description=p@chr9:14556402..14556417,- | |short_description=p@chr9:14556402..14556417,- | ||
}} | }} |
Latest revision as of 20:15, 4 August 2015
Short description: | p@chr9:14556402..14556417, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:14556402..14556417, - |
Coexpression cluster: | MCL_coexpression_mm9:3305 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.51e-14 | 6 |
gut absorptive cell | 1.51e-14 | 6 |
enterocyte | 1.51e-14 | 6 |
columnar/cuboidal epithelial cell | 2.39e-12 | 7 |
intestinal epithelial cell | 3.23e-12 | 9 |
epithelial cell of alimentary canal | 3.23e-12 | 9 |
M cell of gut | 8.58e-08 | 3 |
epithelial cell | 1.25e-07 | 25 |
endo-epithelial cell | 7.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.91e-28 | 31 |
gastrointestinal system | 4.51e-27 | 47 |
mucosa | 4.71e-24 | 15 |
intestinal mucosa | 5.04e-20 | 13 |
wall of intestine | 5.04e-20 | 13 |
gastrointestinal system mucosa | 5.04e-20 | 13 |
organ component layer | 2.37e-16 | 24 |
epithelium of mucosa | 3.23e-12 | 9 |
gastrointestinal system epithelium | 3.23e-12 | 9 |
intestinal epithelium | 3.23e-12 | 9 |
digestive system | 6.95e-11 | 116 |
digestive tract | 6.95e-11 | 116 |
primitive gut | 6.95e-11 | 116 |
endoderm-derived structure | 1.39e-10 | 118 |
endoderm | 1.39e-10 | 118 |
presumptive endoderm | 1.39e-10 | 118 |
simple columnar epithelium | 8.70e-10 | 11 |
subdivision of digestive tract | 3.57e-09 | 114 |
small intestine | 4.95e-09 | 4 |
ileal mucosa | 2.52e-07 | 3 |
ileum | 2.52e-07 | 3 |
mucosa of small intestine | 2.52e-07 | 3 |
wall of small intestine | 2.52e-07 | 3 |
adult organism | 6.93e-07 | 51 |