FFCP PHASE1:Mm9::chr10:85808565..85808585,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:85808565..85808585,+
|short_description=p@chr10:85808565..85808585,+
|description=CAGE_peak_at_chr10:85808565..85808585,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:85808565..85808585,+ | |||
|description=CAGE_peak_at_chr10:85808565..85808585,+ | |||
|id=chr10:85808565..85808585,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.06e-09,6;CL:0000126,5.06e-09,6;CL:0000127,5.06e-09,6;CL:0000222,3.17e-08,7;CL:0002605,3.68e-08,2;CL:0002604,3.68e-08,2;CL:0000333,3.93e-08,10;CL:0000095,3.93e-08,10;CL:0000243,3.93e-08,10;CL:0000123,3.93e-08,10;CL:0000125,3.93e-08,10;CL:0000030,3.93e-08,10;CL:0000339,3.93e-08,10;CL:0002453,8.95e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!1.92e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.28e-11,5;UBERON:0007500,1.28e-11,5;UBERON:0001981,1.28e-11,5;UBERON:0002049,1.28e-11,5;UBERON:0007798,1.28e-11,5;UBERON:0004537,1.28e-11,5;UBERON:0006965,1.28e-11,5;UBERON:0000947,1.00e-08,4;UBERON:0001637,1.00e-08,4;UBERON:0004573,1.00e-08,4;UBERON:0003509,1.00e-08,4;UBERON:0004571,1.00e-08,4;UBERON:0010191,1.00e-08,4;UBERON:0004572,1.00e-08,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0860945256554,11.6583470902442,0.734187008646726,0.782391344348039,1.30815093828268,4.61340983742391,5.8328969722285,1.1198913730029,0,0,0,0,0,0.573066879877513,2.06268836910977,0,0,0,0.677689064138264,0.889294796111139,0,0,1.4209602298922,0.898800331555214,0.768436610643109,0,0.135005938331691,0.210324961351382,1.42825492201902,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0,2.04460721999597,0.529000920747499,2.02905142091174,0.860423876981386,0,0,0,0,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,2.58937883647172,1.33597925158342,0.346970653532272,0.608930956624282,0.691846491768175,0.150722640552623,1.05829836422134,0.502666365318702,0.741584903203122,3.47038456607788,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0.517406741478031,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.465067889500816,0.804820204198858,0.233530684734339,0.493679549740441,0.32833492815819,0.162137619091711,0.438599962275997,0,0.134206418760372,0,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.771494018793504,0.632365371242573,0.885660887877613,2.19798218977925,1.23397163921801,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,1.66277871149944,0.189491411770485,0.325929952884052,0,0,0.837531287209079,0.238043640886014,1.95133647857799,0.157635144106191,1.55025282754142,0.478364305972461,2.29408640602033,0.690739927463582,1.44649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0.819674726883377,1.00988370881749,0.94652465824877,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0.532020700926821,1.07021290561242,0.329098041204242,0,0,0.847328283455281,0.220528398054962,1.81374878235628,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0,0.370850604021019,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0,0.168956125490778,0.469428954583016,0,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0,0,0.116876902181569,0,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0,0,0.588795680537589,0.685738504770831,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,1.14772999241306,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0860945256554,11.6583470902442,0.734187008646726,0.782391344348039,1.30815093828268,4.61340983742391,5.8328969722285,1.1198913730029,0,0,0,0,0,0.573066879877513,2.06268836910977,0,0,0,0.677689064138264,0.889294796111139,0,0,1.4209602298922,0.898800331555214,0.768436610643109,0,0.135005938331691,0.210324961351382,1.42825492201902,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0,2.04460721999597,0.529000920747499,2.02905142091174,0.860423876981386,0,0,0,0,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,2.58937883647172,1.33597925158342,0.346970653532272,0.608930956624282,0.691846491768175,0.150722640552623,1.05829836422134,0.502666365318702,0.741584903203122,3.47038456607788,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0.517406741478031,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.465067889500816,0.804820204198858,0.233530684734339,0.493679549740441,0.32833492815819,0.162137619091711,0.438599962275997,0,0.134206418760372,0,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.771494018793504,0.632365371242573,0.885660887877613,2.19798218977925,1.23397163921801,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,1.66277871149944,0.189491411770485,0.325929952884052,0,0,0.837531287209079,0.238043640886014,1.95133647857799,0.157635144106191,1.55025282754142,0.478364305972461,2.29408640602033,0.690739927463582,1.44649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0.819674726883377,1.00988370881749,0.94652465824877,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0.532020700926821,1.07021290561242,0.329098041204242,0,0,0.847328283455281,0.220528398054962,1.81374878235628,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0,0.370850604021019,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0,0.168956125490778,0.469428954583016,0,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0,0,0.116876902181569,0,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0,0,0.588795680537589,0.685738504770831,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,1.14772999241306,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr10:85808565..85808585,+ | |||
}} | }} |
Latest revision as of 23:05, 4 August 2015
Short description: | p@chr10:85808565..85808585, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85808565..85808585, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.06e-09 | 6 |
macroglial cell | 5.06e-09 | 6 |
astrocyte | 5.06e-09 | 6 |
mesodermal cell | 3.17e-08 | 7 |
astrocyte of the cerebral cortex | 3.68e-08 | 2 |
astrocyte of the hippocampus | 3.68e-08 | 2 |
migratory neural crest cell | 3.93e-08 | 10 |
neuron associated cell | 3.93e-08 | 10 |
glial cell (sensu Vertebrata) | 3.93e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.93e-08 | 10 |
glial cell | 3.93e-08 | 10 |
glioblast | 3.93e-08 | 10 |
glioblast (sensu Vertebrata) | 3.93e-08 | 10 |
oligodendrocyte precursor cell | 8.95e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.28e-11 | 5 |
epithelial tube open at both ends | 1.28e-11 | 5 |
blood vessel | 1.28e-11 | 5 |
vasculature | 1.28e-11 | 5 |
vascular system | 1.28e-11 | 5 |
blood vasculature | 1.28e-11 | 5 |
vascular cord | 1.28e-11 | 5 |
aorta | 1.00e-08 | 4 |
artery | 1.00e-08 | 4 |
systemic artery | 1.00e-08 | 4 |
arterial blood vessel | 1.00e-08 | 4 |
systemic arterial system | 1.00e-08 | 4 |
aortic system | 1.00e-08 | 4 |
arterial system | 1.00e-08 | 4 |