FFCP PHASE1:Mm9::chr2:32380533..32380557,+: Difference between revisions
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|id=chr2:32380533..32380557,+
|short_description=p1@ENSMUST00000150621
|description=CAGE_peak_1_at_ENSMUST00000150621_5end
|association_with_transcript=0bp_to_ENSMU...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=297 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000150621_5end | |||
|cluster_id=chr2:32380533..32380557,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000150621_5end | |||
|id=chr2:32380533..32380557,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.22e-14!9;CL:0002251!1.22e-14!9;CL:0000239!1.84e-10!6;CL:0000677!1.84e-10!6;CL:0000212!1.84e-10!6;CL:0000584!1.84e-10!6;CL:0000075!7.89e-09!7;CL:0002076!5.73e-08!15;CL:0000066!1.75e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.16e-18,9;CL:0002251,1.16e-18,9;CL:0000239,2.98e-16,6;CL:0000677,2.98e-16,6;CL:0000584,2.98e-16,6;CL:0000075,7.56e-14,7;CL:0002076,1.06e-10,15;CL:0000066,2.11e-09,25;CL:0000223,1.02e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.03e-29!59;UBERON:0000160!5.48e-27!43;UBERON:0000344!1.40e-23!15;UBERON:0001242!1.48e-20!13;UBERON:0000060!1.48e-20!13;UBERON:0001262!1.48e-20!13;UBERON:0004786!1.48e-20!13;UBERON:0004923!2.17e-15!24;UBERON:0003350!1.22e-14!9;UBERON:0004808!1.22e-14!9;UBERON:0001277!1.22e-14!9;UBERON:0000485!1.34e-11!11;UBERON:0001007!2.25e-11!128;UBERON:0001555!2.25e-11!128;UBERON:0007026!2.25e-11!128;UBERON:0004119!4.82e-11!130;UBERON:0000925!4.82e-11!130;UBERON:0006595!4.82e-11!130;UBERON:0004921!6.59e-10!126;UBERON:0004185!6.59e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-39,31;UBERON:0000344,2.54e-33,15;UBERON:0001242,2.35e-28,13;UBERON:0001262,2.35e-28,13;UBERON:0004786,2.35e-28,13;UBERON:0005409,2.36e-27,47;UBERON:0004923,4.13e-23,24;UBERON:0003350,1.16e-18,9;UBERON:0004808,1.16e-18,9;UBERON:0001277,1.16e-18,9;UBERON:0000485,4.81e-15,11;UBERON:0002108,4.66e-11,4;UBERON:0001007,3.20e-10,116;UBERON:0001555,3.20e-10,116;UBERON:0007026,3.20e-10,116;UBERON:0004119,5.85e-10,118;UBERON:0000925,5.85e-10,118;UBERON:0006595,5.85e-10,118;UBERON:0004921,2.08e-08,114;UBERON:0000331,2.72e-08,3;UBERON:0002116,2.72e-08,3;UBERON:0001204,2.72e-08,3;UBERON:0001168,2.72e-08,3;UBERON:0001155,3.37e-07,2;UBERON:0000059,3.37e-07,2 | |||
|phase1_expression=0,2.79180326111489,1.81999695755814,2.72217790176147,4.00716583957078,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,2.87986361028132,1.37645568640302,2.8711598205751,0,2.15471232685889,1.14014051673824,1.51218077855958,1.10865255327652,0,0,0,2.59966457776147,0.831173226792462,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,6.42706916109372,0,0,0,0,0,5.59175283654366,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,5.28901133327089,0,0,0.128867461322093,0,0.22237804384487,0,1.89811624617805,1.15289268306808,1.00534083520108,0.994782360205754,0.58489226135736,3.59527763461689,3.02593269824572,1.7922714592893,0,0,0,0,0,0.0701358198903186,0.69560190836683,7.23289725100051,3.45397201251025,1.48076596706161,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.674321731924103,0.661227645802687,0.523511883968059,5.96228877142247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,2.79180326111489,1.81999695755814,2.72217790176147,4.00716583957078,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,2.87986361028132,1.37645568640302,2.8711598205751,0,2.15471232685889,1.14014051673824,1.51218077855958,1.10865255327652,0,0,0,2.59966457776147,0.831173226792462,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,6.42706916109372,0,0,0,0,0,5.59175283654366,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,5.28901133327089,0,0,0.128867461322093,0,0.22237804384487,0,1.89811624617805,1.15289268306808,1.00534083520108,0.994782360205754,0.58489226135736,3.59527763461689,3.02593269824572,1.7922714592893,0,0,0,0,0,0.0701358198903186,0.69560190836683,7.23289725100051,3.45397201251025,1.48076596706161,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.674321731924103,0.661227645802687,0.523511883968059,5.96228877142247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p1@ENSMUST00000150621 | |||
}} | }} |
Latest revision as of 01:31, 5 August 2015
Short description: | p1@ENSMUST00000150621 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000150621_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | 0bp_to_ENSMUST00000150621_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.16e-18 | 9 |
epithelial cell of alimentary canal | 1.16e-18 | 9 |
brush border epithelial cell | 2.98e-16 | 6 |
gut absorptive cell | 2.98e-16 | 6 |
enterocyte | 2.98e-16 | 6 |
columnar/cuboidal epithelial cell | 7.56e-14 | 7 |
endo-epithelial cell | 1.06e-10 | 15 |
epithelial cell | 2.11e-09 | 25 |
endodermal cell | 1.02e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-39 | 31 |
mucosa | 2.54e-33 | 15 |
intestinal mucosa | 2.35e-28 | 13 |
wall of intestine | 2.35e-28 | 13 |
gastrointestinal system mucosa | 2.35e-28 | 13 |
gastrointestinal system | 2.36e-27 | 47 |
organ component layer | 4.13e-23 | 24 |
epithelium of mucosa | 1.16e-18 | 9 |
gastrointestinal system epithelium | 1.16e-18 | 9 |
intestinal epithelium | 1.16e-18 | 9 |
simple columnar epithelium | 4.81e-15 | 11 |
small intestine | 4.66e-11 | 4 |
digestive system | 3.20e-10 | 116 |
digestive tract | 3.20e-10 | 116 |
primitive gut | 3.20e-10 | 116 |
endoderm-derived structure | 5.85e-10 | 118 |
endoderm | 5.85e-10 | 118 |
presumptive endoderm | 5.85e-10 | 118 |
subdivision of digestive tract | 2.08e-08 | 114 |
ileal mucosa | 2.72e-08 | 3 |
ileum | 2.72e-08 | 3 |
mucosa of small intestine | 2.72e-08 | 3 |
wall of small intestine | 2.72e-08 | 3 |
colon | 3.37e-07 | 2 |
large intestine | 3.37e-07 | 2 |