FFCP PHASE1:Mm9::chr6:122541154..122541173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:122541154..122541173,- | |||
|description=CAGE_peak_at_chr6:122541154..122541173,- | |description=CAGE_peak_at_chr6:122541154..122541173,- | ||
|id=chr6:122541154..122541173,- | |id=chr6:122541154..122541173,- | ||
|ontology_enrichment_celltype=CL:0000239!1.55e-07!6;CL:0000677!1.55e-07!6;CL:0000212!1.55e-07!6;CL:0000584!1.55e-07!6;CL:0002563!4.25e-07!9;CL:0002251!4.25e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.90e-15,6;CL:0000677,9.90e-15,6;CL:0000584,9.90e-15,6;CL:0000075,1.66e-12,7;CL:0002563,1.55e-09,9;CL:0002251,1.55e-09,9;CL:0000682,1.81e-08,3;CL:0000473,3.32e-08,7;CL:0000066,6.03e-08,25;CL:0002076,5.68e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.26e-17!59;UBERON:0000160!2.61e-15!43;UBERON:0000344!6.22e-13!15;UBERON:0001242!6.68e-11!13;UBERON:0000060!6.68e-11!13;UBERON:0001262!6.68e-11!13;UBERON:0004786!6.68e-11!13;UBERON:0001007!1.37e-09!128;UBERON:0001555!1.37e-09!128;UBERON:0007026!1.37e-09!128;UBERON:0004119!3.52e-09!130;UBERON:0000925!3.52e-09!130;UBERON:0006595!3.52e-09!130;UBERON:0004921!1.74e-08!126;UBERON:0004185!1.74e-08!126;UBERON:0003350!4.25e-07!9;UBERON:0004808!4.25e-07!9;UBERON:0001277!4.25e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-41,31;UBERON:0005409,3.87e-37,47;UBERON:0000344,1.09e-21,15;UBERON:0001242,2.17e-17,13;UBERON:0001262,2.17e-17,13;UBERON:0004786,2.17e-17,13;UBERON:0001007,2.81e-14,116;UBERON:0001555,2.81e-14,116;UBERON:0007026,2.81e-14,116;UBERON:0004119,6.59e-14,118;UBERON:0000925,6.59e-14,118;UBERON:0006595,6.59e-14,118;UBERON:0004923,1.82e-12,24;UBERON:0004921,3.55e-12,114;UBERON:0002108,1.21e-09,4;UBERON:0003350,1.55e-09,9;UBERON:0004808,1.55e-09,9;UBERON:0001277,1.55e-09,9;UBERON:0000331,1.00e-07,3;UBERON:0002116,1.00e-07,3;UBERON:0001204,1.00e-07,3;UBERON:0001168,1.00e-07,3;UBERON:0000485,1.20e-07,11 | |||
|phase1_expression=0,32.4547129104606,33.2149444754361,18.7527811010235,18.0322462780685,16.6200479192771,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,30.5585527535407,27.0702951659261,32.1569899904411,33.1686737042488,28.2267314818515,14.6318032981408,8.56902441183765,26.3859307679813,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,3.31133251185274,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,14.9113408974498,0,0,9.45191104271788,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.8495179753105,13.7514294665043,0,0,0.257734922644187,2.62188582010345,3.11329261382818,4.75564065281398,12.8122846617018,8.56434564564857,4.77536896720512,7.36138946552258,5.26403035221624,8.98819408654222,11.4553166433588,9.75792238946399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0.242780636154981,0,0,0,0,2.06742634534577,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,9.61886760878507,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0.203319467126849,0.108005340821801,1.25452977608681,0.87345025498471,0.809186078308924,1.1571483801547,1.57053565190418,12.3134224627203,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.228620419965,0.403304740547362,0.292373642219257,0.384847366561318,0.116876902181569,0,0,0,0,0,0.187682475451182,1.09890974560359,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.320125762024346,0.17230640686684,0.952587382566147,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,32.4547129104606,33.2149444754361,18.7527811010235,18.0322462780685,16.6200479192771,13.5495331545405,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,30.5585527535407,27.0702951659261,32.1569899904411,33.1686737042488,28.2267314818515,14.6318032981408,8.56902441183765,26.3859307679813,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,3.31133251185274,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,14.9113408974498,0,0,9.45191104271788,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.8495179753105,13.7514294665043,0,0,0.257734922644187,2.62188582010345,3.11329261382818,4.75564065281398,12.8122846617018,8.56434564564857,4.77536896720512,7.36138946552258,5.26403035221624,8.98819408654222,11.4553166433588,9.75792238946399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0.242780636154981,0,0,0,0,2.06742634534577,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,9.61886760878507,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0.203319467126849,0.108005340821801,1.25452977608681,0.87345025498471,0.809186078308924,1.1571483801547,1.57053565190418,12.3134224627203,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.228620419965,0.403304740547362,0.292373642219257,0.384847366561318,0.116876902181569,0,0,0,0,0,0.187682475451182,1.09890974560359,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.320125762024346,0.17230640686684,0.952587382566147,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p@chr6:122541154..122541173,- | |short_description=p@chr6:122541154..122541173,- | ||
}} | }} |
Latest revision as of 01:47, 5 August 2015
Short description: | p@chr6:122541154..122541173, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:122541154..122541173, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.90e-15 | 6 |
gut absorptive cell | 9.90e-15 | 6 |
enterocyte | 9.90e-15 | 6 |
columnar/cuboidal epithelial cell | 1.66e-12 | 7 |
intestinal epithelial cell | 1.55e-09 | 9 |
epithelial cell of alimentary canal | 1.55e-09 | 9 |
M cell of gut | 1.81e-08 | 3 |
defensive cell | 3.32e-08 | 7 |
epithelial cell | 6.03e-08 | 25 |
endo-epithelial cell | 5.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.50e-41 | 31 |
gastrointestinal system | 3.87e-37 | 47 |
mucosa | 1.09e-21 | 15 |
intestinal mucosa | 2.17e-17 | 13 |
wall of intestine | 2.17e-17 | 13 |
gastrointestinal system mucosa | 2.17e-17 | 13 |
digestive system | 2.81e-14 | 116 |
digestive tract | 2.81e-14 | 116 |
primitive gut | 2.81e-14 | 116 |
endoderm-derived structure | 6.59e-14 | 118 |
endoderm | 6.59e-14 | 118 |
presumptive endoderm | 6.59e-14 | 118 |
organ component layer | 1.82e-12 | 24 |
subdivision of digestive tract | 3.55e-12 | 114 |
small intestine | 1.21e-09 | 4 |
epithelium of mucosa | 1.55e-09 | 9 |
gastrointestinal system epithelium | 1.55e-09 | 9 |
intestinal epithelium | 1.55e-09 | 9 |
ileal mucosa | 1.00e-07 | 3 |
ileum | 1.00e-07 | 3 |
mucosa of small intestine | 1.00e-07 | 3 |
wall of small intestine | 1.00e-07 | 3 |
simple columnar epithelium | 1.20e-07 | 11 |