FFCP PHASE1:Mm9::chr12:53547871..53547894,+: Difference between revisions
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|id=chr12:53547871..53547894,+
|short_description=p@chr12:53547871..53547894,+
|description=CAGE_peak_at_chr12:53547871..53547894,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53547871..53547894,+ | |||
|description=CAGE_peak_at_chr12:53547871..53547894,+ | |||
|id=chr12:53547871..53547894,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.28e-15!25;CL:0000223!2.53e-13!20;CL:0002563!3.91e-12!9;CL:0002251!3.91e-12!9;CL:0000239!4.54e-11!6;CL:0000677!4.54e-11!6;CL:0000212!4.54e-11!6;CL:0000584!4.54e-11!6;CL:0000181!4.11e-10!5;CL:0000417!4.11e-10!5;CL:0000668!4.11e-10!5;CL:0000412!4.11e-10!5;CL:0000182!4.11e-10!5;CL:0000075!2.44e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.34e-26,25;CL:0000223,8.46e-24,20;CL:0000182,1.95e-21,5;CL:0000239,2.92e-17,6;CL:0000677,2.92e-17,6;CL:0000584,2.92e-17,6;CL:0002563,2.84e-16,9;CL:0002251,2.84e-16,9;CL:0000075,8.98e-15,7;CL:0002076,1.47e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.45e-19!22;UBERON:0007499!1.45e-19!22;UBERON:0006925!1.45e-19!22;UBERON:0009497!1.45e-19!22;UBERON:0000015!1.45e-19!22;UBERON:0002423!1.45e-19!22;UBERON:0006235!1.45e-19!22;UBERON:0008835!1.45e-19!22;UBERON:0003894!1.45e-19!22;UBERON:0004161!1.45e-19!22;UBERON:0008836!1.45e-19!22;UBERON:0009854!1.68e-18!23;UBERON:0009856!1.68e-18!23;UBERON:0002365!1.24e-16!25;UBERON:0002330!1.24e-16!25;UBERON:0003929!4.25e-14!55;UBERON:0005172!6.86e-13!49;UBERON:0005173!6.86e-13!49;UBERON:0002417!6.86e-13!49;UBERON:0000916!6.86e-13!49;UBERON:0003350!3.91e-12!9;UBERON:0004808!3.91e-12!9;UBERON:0001277!3.91e-12!9;UBERON:0000490!1.35e-10!66;UBERON:0005911!7.67e-10!69;UBERON:0001242!8.79e-10!13;UBERON:0000060!8.79e-10!13;UBERON:0001262!8.79e-10!13;UBERON:0004786!8.79e-10!13;UBERON:0000485!1.32e-09!11;UBERON:0003914!9.54e-09!47;UBERON:0005256!1.02e-08!47;UBERON:0000344!3.31e-08!15;UBERON:0009569!5.23e-08!66;UBERON:0005177!4.66e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.84e-16,9;UBERON:0004808,2.84e-16,9;UBERON:0001277,2.84e-16,9;UBERON:0003929,1.57e-14,55;UBERON:0002107,4.06e-14,22;UBERON:0007499,4.06e-14,22;UBERON:0006925,4.06e-14,22;UBERON:0009497,4.06e-14,22;UBERON:0000015,4.06e-14,22;UBERON:0002423,4.06e-14,22;UBERON:0006235,4.06e-14,22;UBERON:0008835,4.06e-14,22;UBERON:0003894,4.06e-14,22;UBERON:0004161,4.06e-14,22;UBERON:0008836,4.06e-14,22;UBERON:0009854,1.91e-13,23;UBERON:0009856,1.91e-13,23;UBERON:0000485,3.17e-13,11;UBERON:0002365,2.93e-12,25;UBERON:0002330,2.93e-12,25;UBERON:0000490,1.15e-11,66;UBERON:0001242,4.12e-11,13;UBERON:0001262,4.12e-11,13;UBERON:0004786,4.12e-11,13;UBERON:0005911,4.86e-11,69;UBERON:0000344,1.47e-09,15;UBERON:0005172,2.16e-08,49;UBERON:0005173,2.16e-08,49;UBERON:0002417,2.16e-08,49;UBERON:0000916,2.16e-08,49;UBERON:0005256,1.16e-07,45;UBERON:0003914,2.88e-07,47 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,3.93203474698879,3.50627010962443,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,1.14846392823004,1.29228598847722,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0439019915755,2.58127163094416,2.03991400112325,5.39703191637817,1.94932925234301,3.13618820968135,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26361379216837,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.350679099451593,0,0.442830443938806,0.31399745568275,1.23397163921801,0.592905254174298,0,0,0,0,0.241177159752417,0.50925170356284,0.287696137450811,1.13494658742525,0.274561413188081,0,1.48856379067401,0.624075346229121,0.505157755894224,0.896987067609561,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,1.03371317267288,0,0,0.632073515871632,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,1.74487703819681,2.27499619694768,3.93203474698879,3.50627010962443,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,1.14846392823004,1.29228598847722,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0439019915755,2.58127163094416,2.03991400112325,5.39703191637817,1.94932925234301,3.13618820968135,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26361379216837,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.350679099451593,0,0.442830443938806,0.31399745568275,1.23397163921801,0.592905254174298,0,0,0,0,0.241177159752417,0.50925170356284,0.287696137450811,1.13494658742525,0.274561413188081,0,1.48856379067401,0.624075346229121,0.505157755894224,0.896987067609561,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,1.03371317267288,0,0,0.632073515871632,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr12:53547871..53547894,+ | |||
}} | }} |
Latest revision as of 02:25, 5 August 2015
Short description: | p@chr12:53547871..53547894, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:53547871..53547894, + |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.34e-26 | 25 |
endodermal cell | 8.46e-24 | 20 |
hepatocyte | 1.95e-21 | 5 |
brush border epithelial cell | 2.92e-17 | 6 |
gut absorptive cell | 2.92e-17 | 6 |
enterocyte | 2.92e-17 | 6 |
intestinal epithelial cell | 2.84e-16 | 9 |
epithelial cell of alimentary canal | 2.84e-16 | 9 |
columnar/cuboidal epithelial cell | 8.98e-15 | 7 |
endo-epithelial cell | 1.47e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.84e-16 | 9 |
gastrointestinal system epithelium | 2.84e-16 | 9 |
intestinal epithelium | 2.84e-16 | 9 |
gut epithelium | 1.57e-14 | 55 |
liver | 4.06e-14 | 22 |
epithelial sac | 4.06e-14 | 22 |
digestive gland | 4.06e-14 | 22 |
epithelium of foregut-midgut junction | 4.06e-14 | 22 |
anatomical boundary | 4.06e-14 | 22 |
hepatobiliary system | 4.06e-14 | 22 |
foregut-midgut junction | 4.06e-14 | 22 |
hepatic diverticulum | 4.06e-14 | 22 |
liver primordium | 4.06e-14 | 22 |
septum transversum | 4.06e-14 | 22 |
liver bud | 4.06e-14 | 22 |
digestive tract diverticulum | 1.91e-13 | 23 |
sac | 1.91e-13 | 23 |
simple columnar epithelium | 3.17e-13 | 11 |
exocrine gland | 2.93e-12 | 25 |
exocrine system | 2.93e-12 | 25 |
unilaminar epithelium | 1.15e-11 | 66 |
intestinal mucosa | 4.12e-11 | 13 |
wall of intestine | 4.12e-11 | 13 |
gastrointestinal system mucosa | 4.12e-11 | 13 |
endo-epithelium | 4.86e-11 | 69 |
mucosa | 1.47e-09 | 15 |
abdomen element | 2.16e-08 | 49 |
abdominal segment element | 2.16e-08 | 49 |
abdominal segment of trunk | 2.16e-08 | 49 |
abdomen | 2.16e-08 | 49 |
trunk mesenchyme | 1.16e-07 | 45 |
epithelial tube | 2.88e-07 | 47 |