FFCP PHASE1:Mm9::chr4:14360989..14360995,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1498 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENSMUST00000121022_5end | |association_with_transcript=-42bp_to_ENSMUST00000121022_5end | ||
|cluster_id=chr4:14360989..14360995,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000121022_5end | |description=CAGE_peak_1_at_ENSMUST00000121022_5end | ||
|id=chr4:14360989..14360995,+ | |id=chr4:14360989..14360995,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.98e-21!121;CL:0000012!3.98e-21!121;CL:0002371!1.23e-20!118;CL:0000548!1.04e-18!115;CL:0000004!1.04e-18!115;CL:0000255!1.04e-18!115;CL:0000063!6.81e-17!66;CL:0000219!8.21e-12!54;CL:0000034!7.56e-10!97;CL:0000723!1.10e-08!91;CL:0000048!1.10e-08!91;CL:0002320!1.42e-08!46;CL:0000134!1.42e-08!46;CL:0002076!1.09e-07!15;CL:0000066!3.59e-07!25;CL:0000738!8.44e-07!17;CL:0002087!8.44e-07!17 | |ontology_enrichment_celltype=CL:0000144!3.98e-21!121;CL:0000012!3.98e-21!121;CL:0002371!1.23e-20!118;CL:0000548!1.04e-18!115;CL:0000004!1.04e-18!115;CL:0000255!1.04e-18!115;CL:0000063!6.81e-17!66;CL:0000219!8.21e-12!54;CL:0000034!7.56e-10!97;CL:0000723!1.10e-08!91;CL:0000048!1.10e-08!91;CL:0002320!1.42e-08!46;CL:0000134!1.42e-08!46;CL:0002076!1.09e-07!15;CL:0000066!3.59e-07!25;CL:0000738!8.44e-07!17;CL:0002087!8.44e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.00e-12,54;CL:0000034,6.28e-10,97;CL:0000723,9.27e-09,91;CL:0000048,9.27e-09,91;CL:0002320,1.25e-08,46;CL:0000134,1.25e-08,46;CL:0002076,1.04e-07,15;CL:0000066,3.13e-07,25;CL:0000738,8.13e-07,17;CL:0002087,8.13e-07,17;CL:0002321,8.67e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.42e-08!46;UBERON:0002204!3.03e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-08,46;UBERON:0002204,3.00e-07,32 | |||
|phase1_expression=4.00372117761985,16.7508195666893,10.9199817453489,12.40103266358,10.5188103288733,7.05092942029937,15.1848216387092,8.26389270026088,9.01047821770667,9.59664557920173,7.36237263369671,4.94587385771086,9.24483941628511,9.35398305883272,0.999329285446988,6.07425802169478,6.99561878128147,7.25562980323947,6.85572168028694,6.79023442876848,1.36069264241712,3.27660138962921,7.57479388502913,13.9193407830264,17.6645146421721,18.3754228516806,17.230479846363,13.1437451938392,18.2422482678119,13.6096270070363,14.8559442139054,1.27006134691926,0.61506478758457,0,2.88851619751275,5.15327400611326,3.87921776898501,21.3451131675823,42.973443948809,25.6526634547161,33.5291948177678,28.6879103682547,38.3553178894611,4.78407908307194,4.46058497365864,5.68994931701213,7.04152209913235,9.59310688073965,14.4992880604751,9.52706505463989,6.7193482380174,11.5002051491977,4.36234775750115,9.42970784614748,6.38578218370682,11.3194151855817,7.16333599846892,13.9231464914909,4.24864567805155,2.64495489636016,3.1691570175309,22.0248945844936,14.2287167377782,8.09909745553259,10.8775299882367,10.6572017241915,12.8828047522914,4.61061966385865,0.725827286159344,3.51015439662396,2.3135745748652,1.42825492201902,3.3130281142742,2.08234358665422,2.49198224647415,1.83843757322004,7.70811166995721,0.766124028511126,0.614426133024974,3.56092976871523,2.47016637726506,2.08365348222704,3.62937898701795,6.75315132038016,0.763991238884051,2.35702868378934,1.99320353118744,2.23679334990361,10.9802980333117,7.48158445057177,12.7540375028738,6.0229671388697,2.03991400112325,0.539703191637817,1.29955283489534,1.79210754838934,1.54488862144927,9.37366774179318,68.3237192105545,59.3610485177372,4.50698943285378,26.9485602570067,22.9324715735981,7.11066703153331,16.2368280758411,16.4683912558814,22.7486000256652,1.48439043634778,1.55362730188303,1.92974780784272,1.21439728736295,3.04465478312141,0.691846491768175,1.80867168663147,1.52865319276416,1.88499886994513,5.93267922562497,3.18118585223806,6.19227386364912,1.7794353494215,1.98757366614354,2.42437626567611,7.45567044872489,2.04946557908083,0.41889341362691,4.34276993854605,6.11057134980193,4.79922184794726,5.71816021828791,1.19832511523858,1.37250180845588,0.628271760564322,0.869121600961382,1.79000820131231,1.87009240103604,1.29793010454206,3.1570202793598,2.86136032403214,2.0217820674694,1.26265113531884,0.650602214813519,1.83921683546778,2.34080768746954,0.90422890701429,0.612328492361951,0.896796041993948,1.40552586839593,2.84573707812917,1.29340795759705,1.13463648100692,1.05570674498369,1.97276159184817,3.89266148915837,4.179025998266,2.67516777330327,0.995171334092466,2.80885274925294,4.63226232806487,4.54661599032948,4.97101854085205,2.81431271977315,5.58192390529146,2.84093682702252,4.52557733019029,3.08534225774756,2.32533944750408,2.68273401399619,1.63471479314037,1.97471819896177,0.985004784474571,0.972825714550269,0.584799949701329,1.09775057645525,0.939444931322602,1.89260953707715,0.823236899034275,1.65209391491899,5.28901133327089,4.05247676016945,5.10920678092965,2.70621668776396,2.62188582010345,4.66993892074228,3.80451252225118,2.84717436926707,4.44687177754829,4.52403375840485,2.78539060857611,1.9496408711912,1.79763881730844,2.80979464837102,2.58883655230677,2.27601481143698,2.51346727741403,0,2.24016460629846,3.49114476901726,1.26244475802573,1.13825766823663,2.21415221969403,1.8839847340965,1.72756029490521,0.889357881261447,1.16791574001266,0.786235980452812,2.69834534861824,0.811440485554012,1.20588579876208,1.01850340712568,3.16465751195892,1.45921704097532,1.09824565275233,0,1.86070473834252,1.5601883655728,0.505157755894224,0.717589654087649,0.964887042726734,6.46636165583116,2.65287976478679,2.44447464663039,3.73439188705414,4.69380496577004,2.68010011906905,5.2369600994923,3.90267295715598,2.20689201748667,4.87222317227305,1.91345722388985,6.55453258862952,7.7708241839653,3.7608755231193,10.5553898757491,9.79030230873677,2.45882136509518,2.75936746304733,0.321101179975584,1.17211686592203,3.27869890753351,0,3.15508219416257,3.90438744296638,2.58508077279359,0.238968797952552,3.11918143715352,1.98153571552183,1.61924280669958,2.63030272120181,3.95287777946523,1.92792789853084,2.55492153374884,1.42452482933804,1.30309567482861,6.59880491890142,1.32745138339963,1.45668381692989,1.51161778482376,2.64047111658257,2.06711325016541,3.99665692327106,2.84271122485043,0.727067458955011,1.78248689192361,0.316036757935816,2.10837217149998,0,3.06395645178409,1.62054984628179,3.23396709456886,1.50035924522115,1.59606210278046,1.24858172321449,1.81003922662333,1.8267896946876,6.33613611772018,2.75381692122966,1.98475558249466,3.13283880588812,0.807322133479528,1.44751019827574,3.81991500810037,1.64140899745061,4.08073171281791,0.927126510052548,3.07567585436135,1.44470807574256,2.59272338317596,1.31857919903284,1.50363650493128,0.686334519619568,3.22959016988325,4.47844647435706,3.17859939750175,8.59203556213602,1.73984796469624,2.64315307264903,2.91614420218863,5.43629569637619,6.11415178489297,7.01294601201068,1.81837602595739,8.37619014348895,4.53652406521275,3.10669656543463,0,1.04661582230785,1.98550188548517,2.13896307178452,2.19571699912143,2.36538575687089,1.29092962510329,1.5624526181274,1.67774951081137,0.241584120826006,0.864090018773596,0.948033361884535,2.63542779877213,1.64337531463724,2.20865399062252,3.40150721768215,2.18549490259391,0.961563596159751,0.443068581523732,1.41353029927407,0.533447646584999,2.21817607301049,1.75424185331554,1.44317762460494,0.584384510907845,2.49403421976732,3.99574716073316,8.16396095146229,8.05846158547577,16.227925898704,9.00875882165674,3.29672923681077,4.50173596066038,3.51100472824754,1.12950368523413,0,0.572895513439397,4.1244763762485,1.37016503954128,0,1.35004500046361,1.35096360967266,0.906284817968409,2.5888015587591,1.45302286617847,0.399024873401031,1.70733605754134,4.61902762429759,1.67690530102386,1.2869045591501,1.77797382241292,1.44224540067226,0.962757628775446,1.26348605881899,2.02783439912192,1.88626341386076,1.49826411951812,1.08842759088278,1.09127391015665,0.476293691283074,2.0859178670074,0.578727661391115,3.29668720642645,1.91358596174717,4.11443102862498,1.59728225543404,1.90748951957857,2.90692833264657,2.1645157495526,1.01537529470012,1.28049581010941,2.63069711437843,1.7654534799962,1.12228454331548,2.60997039873183,0.985044823755635,2.45538625901814,2.01417893541756,0.964533054905707,2.74791635731741,1.87145286756327,1.93383948643468,2.86932498103265,3.08827986767322,2.78241402744506 | |phase1_expression=4.00372117761985,16.7508195666893,10.9199817453489,12.40103266358,10.5188103288733,7.05092942029937,15.1848216387092,8.26389270026088,9.01047821770667,9.59664557920173,7.36237263369671,4.94587385771086,9.24483941628511,9.35398305883272,0.999329285446988,6.07425802169478,6.99561878128147,7.25562980323947,6.85572168028694,6.79023442876848,1.36069264241712,3.27660138962921,7.57479388502913,13.9193407830264,17.6645146421721,18.3754228516806,17.230479846363,13.1437451938392,18.2422482678119,13.6096270070363,14.8559442139054,1.27006134691926,0.61506478758457,0,2.88851619751275,5.15327400611326,3.87921776898501,21.3451131675823,42.973443948809,25.6526634547161,33.5291948177678,28.6879103682547,38.3553178894611,4.78407908307194,4.46058497365864,5.68994931701213,7.04152209913235,9.59310688073965,14.4992880604751,9.52706505463989,6.7193482380174,11.5002051491977,4.36234775750115,9.42970784614748,6.38578218370682,11.3194151855817,7.16333599846892,13.9231464914909,4.24864567805155,2.64495489636016,3.1691570175309,22.0248945844936,14.2287167377782,8.09909745553259,10.8775299882367,10.6572017241915,12.8828047522914,4.61061966385865,0.725827286159344,3.51015439662396,2.3135745748652,1.42825492201902,3.3130281142742,2.08234358665422,2.49198224647415,1.83843757322004,7.70811166995721,0.766124028511126,0.614426133024974,3.56092976871523,2.47016637726506,2.08365348222704,3.62937898701795,6.75315132038016,0.763991238884051,2.35702868378934,1.99320353118744,2.23679334990361,10.9802980333117,7.48158445057177,12.7540375028738,6.0229671388697,2.03991400112325,0.539703191637817,1.29955283489534,1.79210754838934,1.54488862144927,9.37366774179318,68.3237192105545,59.3610485177372,4.50698943285378,26.9485602570067,22.9324715735981,7.11066703153331,16.2368280758411,16.4683912558814,22.7486000256652,1.48439043634778,1.55362730188303,1.92974780784272,1.21439728736295,3.04465478312141,0.691846491768175,1.80867168663147,1.52865319276416,1.88499886994513,5.93267922562497,3.18118585223806,6.19227386364912,1.7794353494215,1.98757366614354,2.42437626567611,7.45567044872489,2.04946557908083,0.41889341362691,4.34276993854605,6.11057134980193,4.79922184794726,5.71816021828791,1.19832511523858,1.37250180845588,0.628271760564322,0.869121600961382,1.79000820131231,1.87009240103604,1.29793010454206,3.1570202793598,2.86136032403214,2.0217820674694,1.26265113531884,0.650602214813519,1.83921683546778,2.34080768746954,0.90422890701429,0.612328492361951,0.896796041993948,1.40552586839593,2.84573707812917,1.29340795759705,1.13463648100692,1.05570674498369,1.97276159184817,3.89266148915837,4.179025998266,2.67516777330327,0.995171334092466,2.80885274925294,4.63226232806487,4.54661599032948,4.97101854085205,2.81431271977315,5.58192390529146,2.84093682702252,4.52557733019029,3.08534225774756,2.32533944750408,2.68273401399619,1.63471479314037,1.97471819896177,0.985004784474571,0.972825714550269,0.584799949701329,1.09775057645525,0.939444931322602,1.89260953707715,0.823236899034275,1.65209391491899,5.28901133327089,4.05247676016945,5.10920678092965,2.70621668776396,2.62188582010345,4.66993892074228,3.80451252225118,2.84717436926707,4.44687177754829,4.52403375840485,2.78539060857611,1.9496408711912,1.79763881730844,2.80979464837102,2.58883655230677,2.27601481143698,2.51346727741403,0,2.24016460629846,3.49114476901726,1.26244475802573,1.13825766823663,2.21415221969403,1.8839847340965,1.72756029490521,0.889357881261447,1.16791574001266,0.786235980452812,2.69834534861824,0.811440485554012,1.20588579876208,1.01850340712568,3.16465751195892,1.45921704097532,1.09824565275233,0,1.86070473834252,1.5601883655728,0.505157755894224,0.717589654087649,0.964887042726734,6.46636165583116,2.65287976478679,2.44447464663039,3.73439188705414,4.69380496577004,2.68010011906905,5.2369600994923,3.90267295715598,2.20689201748667,4.87222317227305,1.91345722388985,6.55453258862952,7.7708241839653,3.7608755231193,10.5553898757491,9.79030230873677,2.45882136509518,2.75936746304733,0.321101179975584,1.17211686592203,3.27869890753351,0,3.15508219416257,3.90438744296638,2.58508077279359,0.238968797952552,3.11918143715352,1.98153571552183,1.61924280669958,2.63030272120181,3.95287777946523,1.92792789853084,2.55492153374884,1.42452482933804,1.30309567482861,6.59880491890142,1.32745138339963,1.45668381692989,1.51161778482376,2.64047111658257,2.06711325016541,3.99665692327106,2.84271122485043,0.727067458955011,1.78248689192361,0.316036757935816,2.10837217149998,0,3.06395645178409,1.62054984628179,3.23396709456886,1.50035924522115,1.59606210278046,1.24858172321449,1.81003922662333,1.8267896946876,6.33613611772018,2.75381692122966,1.98475558249466,3.13283880588812,0.807322133479528,1.44751019827574,3.81991500810037,1.64140899745061,4.08073171281791,0.927126510052548,3.07567585436135,1.44470807574256,2.59272338317596,1.31857919903284,1.50363650493128,0.686334519619568,3.22959016988325,4.47844647435706,3.17859939750175,8.59203556213602,1.73984796469624,2.64315307264903,2.91614420218863,5.43629569637619,6.11415178489297,7.01294601201068,1.81837602595739,8.37619014348895,4.53652406521275,3.10669656543463,0,1.04661582230785,1.98550188548517,2.13896307178452,2.19571699912143,2.36538575687089,1.29092962510329,1.5624526181274,1.67774951081137,0.241584120826006,0.864090018773596,0.948033361884535,2.63542779877213,1.64337531463724,2.20865399062252,3.40150721768215,2.18549490259391,0.961563596159751,0.443068581523732,1.41353029927407,0.533447646584999,2.21817607301049,1.75424185331554,1.44317762460494,0.584384510907845,2.49403421976732,3.99574716073316,8.16396095146229,8.05846158547577,16.227925898704,9.00875882165674,3.29672923681077,4.50173596066038,3.51100472824754,1.12950368523413,0,0.572895513439397,4.1244763762485,1.37016503954128,0,1.35004500046361,1.35096360967266,0.906284817968409,2.5888015587591,1.45302286617847,0.399024873401031,1.70733605754134,4.61902762429759,1.67690530102386,1.2869045591501,1.77797382241292,1.44224540067226,0.962757628775446,1.26348605881899,2.02783439912192,1.88626341386076,1.49826411951812,1.08842759088278,1.09127391015665,0.476293691283074,2.0859178670074,0.578727661391115,3.29668720642645,1.91358596174717,4.11443102862498,1.59728225543404,1.90748951957857,2.90692833264657,2.1645157495526,1.01537529470012,1.28049581010941,2.63069711437843,1.7654534799962,1.12228454331548,2.60997039873183,0.985044823755635,2.45538625901814,2.01417893541756,0.964533054905707,2.74791635731741,1.87145286756327,1.93383948643468,2.86932498103265,3.08827986767322,2.78241402744506 | ||
|short_description=p1@ENSMUST00000121022 | |short_description=p1@ENSMUST00000121022 | ||
}} | }} |
Latest revision as of 03:12, 5 August 2015
Short description: | p1@ENSMUST00000121022 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000121022_5end |
Coexpression cluster: | MCL_coexpression_mm9:1498 |
Association with transcript: | -42bp_to_ENSMUST00000121022_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 7.00e-12 | 54 |
stem cell | 6.28e-10 | 97 |
somatic stem cell | 9.27e-09 | 91 |
multi fate stem cell | 9.27e-09 | 91 |
connective tissue cell | 1.25e-08 | 46 |
mesenchymal cell | 1.25e-08 | 46 |
endo-epithelial cell | 1.04e-07 | 15 |
epithelial cell | 3.13e-07 | 25 |
leukocyte | 8.13e-07 | 17 |
nongranular leukocyte | 8.13e-07 | 17 |
embryonic cell | 8.67e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.25e-08 | 46 |
musculoskeletal system | 3.00e-07 | 32 |