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FFCP PHASE1:Mm9::chr2:35960919..35960954,-: Difference between revisions

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{{FFCP|EntrezGene=16874|HGNC=|MCL_coexpression_id=26|UniProt=E9QN35,E9QN32,Q9R1R0|association_with_transcript=0bp_to_ENSMUST00000112963,ENSMUST00000112967,NM_001083125,NM_008500,uc008jlf.1,uc008jlg.1_5end|description=CAGE_peak_1_at_Lhx6_5end|id=chr2:35960919..35960954,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!6.57e-09!39;UBERON:0001890!6.57e-09!39;UBERON:0006240!6.57e-09!39;UBERON:0003080!3.06e-08!40;UBERON:0000956!3.51e-08!21;UBERON:0001869!3.51e-08!21;UBERON:0000203!3.51e-08!21;UBERON:0002791!3.06e-07!29;UBERON:0003528!3.06e-07!29;UBERON:0001893!3.06e-07!29;UBERON:0000025!6.18e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.70e-10,39;UBERON:0001890,1.70e-10,39;UBERON:0006240,1.70e-10,39;UBERON:0003080,6.51e-10,40;UBERON:0000956,7.71e-10,21;UBERON:0001869,7.71e-10,21;UBERON:0000203,7.71e-10,21;UBERON:0003528,9.41e-09,29;UBERON:0002791,9.41e-09,29;UBERON:0001893,9.41e-09,29;UBERON:0002616,4.70e-07,46;UBERON:0002619,4.83e-07,17;UBERON:0000025,9.30e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,1.26766280701236,1.35537812827653,1.77858959222228,0,0,0,1.49800055259202,0.384218305321555,15.4497522339632,16.2007125998029,10.7265730289205,0.285650984403804,0.883474163806454,14.9438775042244,12.172374819316,13.7882817991503,0,0.127687338085188,0,1.58263545276233,1.28082701043374,2.6045668527838,0,0,0.61119299110724,0.883885756421003,0.427115042397309,0.372798891650601,0,0.151143120213571,50.1465565453903,3.44169550792555,0,0,0,0,0.842666520790511,2.04516387093669,1.55871602761721,0.70667914902068,0,2.56652954828636,0,0,0,0,0,0.11418387971906,1.03575153458869,0.29688427812965,0.520455980298408,0.304465478312141,0,0.452167921657868,1.29347577849275,1.13099932196708,0.741584903203122,3.47038456607788,0.884610551949874,1.61766849947409,2.87093973998512,0.484875253135222,0,0,0,0,0,0,0,0,1.37250180845588,6.91098936620754,3.47648640384553,2.81287003063364,1.24672826735736,2.43361894601636,0.81471491080253,0.995255764880744,0,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,0.30140963567143,0.816437989815934,0.640568601424249,0.937017245597288,0,0.431135985865684,0.756424320671277,0.879755620819744,1.31517439456545,0.834141747676794,2.43776516565517,1.64625709126355,0.995171334092466,0,0,0,0,0,0.900310307305074,1.65721314909647,1.37734962223183,1.3884040159864,1.86027155800326,2.14618721119695,4.2035523252181,1.6455984991348,4.43252153013557,6.4044359541226,3.65499968563331,3.29325172936576,9.26024289446565,2.94405927989778,14.2008365083413,0,0,1.06644125267617,1.62565670302307,1.67527699718721,1.00841762311671,1.11189021922435,0.951128130562796,0,1.15289268306808,1.50801125280162,0.596869416123452,1.55971269695296,0.898819408654221,0,0.597423819763102,2.0863469104839,1.48523066392647,1.1270773567308,1.01825663922657,1.16371492300575,1.68325967736765,3.28829993046138,0.442830443938806,1.09899109488962,0.740382983530803,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0.763877555344259,1.43848068725405,1.13494658742525,2.47105271869273,1.43768206527355,2.60498663367952,1.5601883655728,0.252578877947112,0.896987067609561,0.482443521363367,1.29327233116623,2.08440552947533,6.35563408123901,5.7713329163564,6.10194645550105,2.1775813467436,3.09456733151818,3.12213836572478,3.31033802623001,3.76489972402917,1.59454768657487,1.14704320301017,0.863424909329478,2.16973587872267,0,0,2.45882136509518,0.827810238914197,0.160550589987792,0.117211686592203,1.3114795630134,3.02965112645248,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,1.84522110770749,0.712262414669021,1.46598263418218,0.659880491890142,1.32745138339963,0.728341908464944,0,2.82907619633847,1.47650946440386,1.53717573971964,4.9101375701962,3.99887102425256,1.42598951353889,1.26414703174326,2.10837217149998,1.03135543248187,0.340439605753788,1.8006109403131,2.06973894052407,2.14337035031592,3.19212420556092,2.67553226403106,1.81003922662333,2.13125464380219,2.11204537257339,0.21183207086382,0.220528398054962,1.48397627647332,2.58343082713449,1.26657142349127,0.835606408021955,0.492422699235184,1.1659233465194,0,0.341741761595705,1.23832120777933,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0,0,0.158167996790568,1.01659733563424,1.40406943068342,1.25452977608681,1.52853794622324,0.674321731924103,1.81837602595739,0.523511883968059,0.129614973291793,0,0,1.19613236835183,0.827292452285488,1.55560950675238,0.516639293910924,0.675824501963113,1.5256441023948,0.781226309063701,0.524296722128554,0.241584120826006,0.576060012515731,0,0.608175645870493,0.410843828659309,0.51968329191118,1.07416017400489,0,0.360586348559907,0.443068581523732,0.504832249740738,0.457240839929999,0.302478555410522,0,0.192423683280659,0.467507608726276,2.26730383615211,0,0.269141569828427,1.00730769818447,2.31827512838629,1.12609485270709,0.549454872801795,0.857473516316263,1.00314420807073,3.95326289831947,3.22227665555024,2.86447756719698,2.92150409984269,2.05524755931193,3.0215755895588,1.35004500046361,4.05289082901798,3.62513927187364,1.55328093525546,2.17953429926771,3.59122386060928,1.87806966329548,1.70174701947806,1.04806581313991,2.5738091183002,2.889207461421,3.29656091582231,4.1719497246936,1.51618327058278,2.28131369901216,2.26351609663291,2.1537546718073,3.58540853467268,3.33125719942557,3.33405583898152,2.20180219295225,1.92909220463705,2.88460130562315,2.79677948255355,3.08582327146874,2.48466128623072,2.38436189947321,3.63366041580821,2.82328141245992,2.70766745253365,2.74391959309159,4.47218509444333,3.12349461845482,3.36685362994643,2.96587545310435,2.9551344712669,3.6830793885272,2.94379998253335,3.2794123866794,3.99696924700713,3.04111090979031,3.43793686477277,2.86932498103265,2.20591419119516,2.31867835620421|short_description=p1@Lhx6}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16874
|HGNC=
|MCL_coexpression_id=26
|TSSclassifier=NA
|UniProt=uniprot:E9QN35,uniprot:E9QN32,uniprot:Q9R1R0
|association_with_transcript=0bp_to_ENSMUST00000112963,ENSMUST00000112967,NM_001083125,NM_008500,uc008jlf.1,uc008jlg.1_5end
|cluster_id=chr2:35960919..35960954,-
|description=CAGE_peak_1_at_Lhx6_5end
|id=chr2:35960919..35960954,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002780!6.57e-09!39;UBERON:0001890!6.57e-09!39;UBERON:0006240!6.57e-09!39;UBERON:0003080!3.06e-08!40;UBERON:0000956!3.51e-08!21;UBERON:0001869!3.51e-08!21;UBERON:0000203!3.51e-08!21;UBERON:0002791!3.06e-07!29;UBERON:0003528!3.06e-07!29;UBERON:0001893!3.06e-07!29;UBERON:0000025!6.18e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.70e-10,39;UBERON:0001890,1.70e-10,39;UBERON:0006240,1.70e-10,39;UBERON:0003080,6.51e-10,40;UBERON:0000956,7.71e-10,21;UBERON:0001869,7.71e-10,21;UBERON:0000203,7.71e-10,21;UBERON:0003528,9.41e-09,29;UBERON:0002791,9.41e-09,29;UBERON:0001893,9.41e-09,29;UBERON:0002616,4.70e-07,46;UBERON:0002619,4.83e-07,17;UBERON:0000025,9.30e-07,114
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,1.26766280701236,1.35537812827653,1.77858959222228,0,0,0,1.49800055259202,0.384218305321555,15.4497522339632,16.2007125998029,10.7265730289205,0.285650984403804,0.883474163806454,14.9438775042244,12.172374819316,13.7882817991503,0,0.127687338085188,0,1.58263545276233,1.28082701043374,2.6045668527838,0,0,0.61119299110724,0.883885756421003,0.427115042397309,0.372798891650601,0,0.151143120213571,50.1465565453903,3.44169550792555,0,0,0,0,0.842666520790511,2.04516387093669,1.55871602761721,0.70667914902068,0,2.56652954828636,0,0,0,0,0,0.11418387971906,1.03575153458869,0.29688427812965,0.520455980298408,0.304465478312141,0,0.452167921657868,1.29347577849275,1.13099932196708,0.741584903203122,3.47038456607788,0.884610551949874,1.61766849947409,2.87093973998512,0.484875253135222,0,0,0,0,0,0,0,0,1.37250180845588,6.91098936620754,3.47648640384553,2.81287003063364,1.24672826735736,2.43361894601636,0.81471491080253,0.995255764880744,0,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,0.30140963567143,0.816437989815934,0.640568601424249,0.937017245597288,0,0.431135985865684,0.756424320671277,0.879755620819744,1.31517439456545,0.834141747676794,2.43776516565517,1.64625709126355,0.995171334092466,0,0,0,0,0,0.900310307305074,1.65721314909647,1.37734962223183,1.3884040159864,1.86027155800326,2.14618721119695,4.2035523252181,1.6455984991348,4.43252153013557,6.4044359541226,3.65499968563331,3.29325172936576,9.26024289446565,2.94405927989778,14.2008365083413,0,0,1.06644125267617,1.62565670302307,1.67527699718721,1.00841762311671,1.11189021922435,0.951128130562796,0,1.15289268306808,1.50801125280162,0.596869416123452,1.55971269695296,0.898819408654221,0,0.597423819763102,2.0863469104839,1.48523066392647,1.1270773567308,1.01825663922657,1.16371492300575,1.68325967736765,3.28829993046138,0.442830443938806,1.09899109488962,0.740382983530803,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0.763877555344259,1.43848068725405,1.13494658742525,2.47105271869273,1.43768206527355,2.60498663367952,1.5601883655728,0.252578877947112,0.896987067609561,0.482443521363367,1.29327233116623,2.08440552947533,6.35563408123901,5.7713329163564,6.10194645550105,2.1775813467436,3.09456733151818,3.12213836572478,3.31033802623001,3.76489972402917,1.59454768657487,1.14704320301017,0.863424909329478,2.16973587872267,0,0,2.45882136509518,0.827810238914197,0.160550589987792,0.117211686592203,1.3114795630134,3.02965112645248,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,1.84522110770749,0.712262414669021,1.46598263418218,0.659880491890142,1.32745138339963,0.728341908464944,0,2.82907619633847,1.47650946440386,1.53717573971964,4.9101375701962,3.99887102425256,1.42598951353889,1.26414703174326,2.10837217149998,1.03135543248187,0.340439605753788,1.8006109403131,2.06973894052407,2.14337035031592,3.19212420556092,2.67553226403106,1.81003922662333,2.13125464380219,2.11204537257339,0.21183207086382,0.220528398054962,1.48397627647332,2.58343082713449,1.26657142349127,0.835606408021955,0.492422699235184,1.1659233465194,0,0.341741761595705,1.23832120777933,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0,0,0.158167996790568,1.01659733563424,1.40406943068342,1.25452977608681,1.52853794622324,0.674321731924103,1.81837602595739,0.523511883968059,0.129614973291793,0,0,1.19613236835183,0.827292452285488,1.55560950675238,0.516639293910924,0.675824501963113,1.5256441023948,0.781226309063701,0.524296722128554,0.241584120826006,0.576060012515731,0,0.608175645870493,0.410843828659309,0.51968329191118,1.07416017400489,0,0.360586348559907,0.443068581523732,0.504832249740738,0.457240839929999,0.302478555410522,0,0.192423683280659,0.467507608726276,2.26730383615211,0,0.269141569828427,1.00730769818447,2.31827512838629,1.12609485270709,0.549454872801795,0.857473516316263,1.00314420807073,3.95326289831947,3.22227665555024,2.86447756719698,2.92150409984269,2.05524755931193,3.0215755895588,1.35004500046361,4.05289082901798,3.62513927187364,1.55328093525546,2.17953429926771,3.59122386060928,1.87806966329548,1.70174701947806,1.04806581313991,2.5738091183002,2.889207461421,3.29656091582231,4.1719497246936,1.51618327058278,2.28131369901216,2.26351609663291,2.1537546718073,3.58540853467268,3.33125719942557,3.33405583898152,2.20180219295225,1.92909220463705,2.88460130562315,2.79677948255355,3.08582327146874,2.48466128623072,2.38436189947321,3.63366041580821,2.82328141245992,2.70766745253365,2.74391959309159,4.47218509444333,3.12349461845482,3.36685362994643,2.96587545310435,2.9551344712669,3.6830793885272,2.94379998253335,3.2794123866794,3.99696924700713,3.04111090979031,3.43793686477277,2.86932498103265,2.20591419119516,2.31867835620421
|short_description=p1@Lhx6
}}

Revision as of 03:19, 5 August 2015

Short description:p1@Lhx6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lhx6_5end
Coexpression cluster:MCL_coexpression_mm9:26
Association with transcript: 0bp_to_ENSMUST00000112963, ENSMUST00000112967, NM_001083125, NM_008500, uc008jlf.1, uc008jlg.1_5end
EntrezGene:16874
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Lhx6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.20
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G350.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G16.40
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D29.26
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G114.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of forebrain1.70e-1039
forebrain1.70e-1039
future forebrain1.70e-1039
anterior neural tube6.51e-1040
cerebral cortex7.71e-1021
cerebral hemisphere7.71e-1021
pallium7.71e-1021
brain grey matter9.41e-0929
regional part of telencephalon9.41e-0929
telencephalon9.41e-0929
regional part of brain4.70e-0746
regional part of cerebral cortex4.83e-0717
tube9.30e-07114
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