FFCP PHASE1:Mm9::chr15:28753268..28753271,+: Difference between revisions
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|id=chr15:28753268..28753271,+
|short_description=p@chr15:28753268..28753271,+
|description=CAGE_peak_at_chr15:28753268..28753271,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:28753268..28753271,+ | |||
|description=CAGE_peak_at_chr15:28753268..28753271,+ | |||
|id=chr15:28753268..28753271,+ | |||
|ontology_enrichment_celltype=CL:0000068!5.39e-10!3;CL:0002202!5.39e-10!3;CL:0000069!5.39e-10!3;CL:0002632!5.39e-10!3;CL:0002368!5.39e-10!3;CL:0000307!5.39e-10!3;CL:0000377!5.39e-10!3;CL:0000349!5.77e-10!3;CL:0000351!5.77e-10!3;CL:0002076!5.24e-07!15;CL:0000223!7.75e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.09e-15,6;CL:0000677,6.09e-15,6;CL:0000584,6.09e-15,6;CL:0000349,2.70e-14,3;CL:0000351,2.70e-14,3;CL:0000075,6.58e-13,7;CL:0000223,4.04e-12,20;CL:0002076,1.37e-10,15;CL:0002563,3.46e-10,9;CL:0002251,3.46e-10,9;CL:0000066,9.96e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.75e-12!15;UBERON:0001007!1.60e-10!128;UBERON:0001555!1.60e-10!128;UBERON:0007026!1.60e-10!128;UBERON:0004119!2.79e-10!130;UBERON:0000925!2.79e-10!130;UBERON:0006595!2.79e-10!130;UBERON:0003126!5.39e-10!3;UBERON:0001005!5.39e-10!3;UBERON:0007196!5.39e-10!3;UBERON:0001558!5.39e-10!3;UBERON:0000358!5.77e-10!3;UBERON:0000307!5.77e-10!3;UBERON:0004921!1.52e-08!126;UBERON:0004185!1.52e-08!126;UBERON:0001242!4.07e-08!13;UBERON:0000060!4.07e-08!13;UBERON:0001262!4.07e-08!13;UBERON:0004786!4.07e-08!13;UBERON:0001962!2.01e-07!2;UBERON:0001961!2.01e-07!2;UBERON:0001744!2.01e-07!2;UBERON:0004923!3.55e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.40e-16,15;UBERON:0000358,2.70e-14,3;UBERON:0000307,2.70e-14,3;UBERON:0007010,2.70e-14,3;UBERON:0001242,3.01e-12,13;UBERON:0001262,3.01e-12,13;UBERON:0004786,3.01e-12,13;UBERON:0003199,2.31e-11,1;UBERON:0004923,2.76e-10,24;UBERON:0003350,3.46e-10,9;UBERON:0004808,3.46e-10,9;UBERON:0001277,3.46e-10,9;UBERON:0000485,1.90e-08,11 | |||
|phase1_expression=0,0,0,1.20985684522732,1.00179145989269,0,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,2.98232065387321,0,0,0,2.09025761402011,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,1.77588762699252,0.179427713218951,3.18980771091749,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,1.20985684522732,1.00179145989269,0,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,2.98232065387321,0,0,0,2.09025761402011,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,1.77588762699252,0.179427713218951,3.18980771091749,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:28753268..28753271,+ | |||
}} | }} |
Latest revision as of 03:50, 5 August 2015
Short description: | p@chr15:28753268..28753271, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:28753268..28753271, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.09e-15 | 6 |
gut absorptive cell | 6.09e-15 | 6 |
enterocyte | 6.09e-15 | 6 |
extraembryonic cell | 2.70e-14 | 3 |
trophoblast cell | 2.70e-14 | 3 |
columnar/cuboidal epithelial cell | 6.58e-13 | 7 |
endodermal cell | 4.04e-12 | 20 |
endo-epithelial cell | 1.37e-10 | 15 |
intestinal epithelial cell | 3.46e-10 | 9 |
epithelial cell of alimentary canal | 3.46e-10 | 9 |
epithelial cell | 9.96e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.40e-16 | 15 |
blastocyst | 2.70e-14 | 3 |
blastula | 2.70e-14 | 3 |
cleaving embryo | 2.70e-14 | 3 |
intestinal mucosa | 3.01e-12 | 13 |
wall of intestine | 3.01e-12 | 13 |
gastrointestinal system mucosa | 3.01e-12 | 13 |
egg chamber | 2.31e-11 | 1 |
organ component layer | 2.76e-10 | 24 |
epithelium of mucosa | 3.46e-10 | 9 |
gastrointestinal system epithelium | 3.46e-10 | 9 |
intestinal epithelium | 3.46e-10 | 9 |
simple columnar epithelium | 1.90e-08 | 11 |